Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001962.1 Hibiscus syriacus cultivar Beakdansim tig00003966_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62768

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4511--4537
12
2.2
12
100
0
54
33
33
25
7
1.84
7341--7375
3
12.3
3
88
11
56
37
0
0
62
0.95
13016--13465
85
5.3
85
81
5
514
26
18
20
34
1.96
13066--13465
171
2.3
171
89
0
593
26
18
20
34
1.96
13536--13881
124
2.8
124
88
0
523
25
14
23
36
1.93
13950--14134
64
2.8
64
86
4
255
31
14
18
34
1.92
14994--15254
95
2.7
95
86
3
326
31
17
18
33
1.94
19586--19751
15
10.9
15
65
21
62
71
2
2
24
1.10
19632--19713
26
3.1
25
81
15
78
71
2
1
24
1.05
19632--19774
33
4.3
33
74
18
104
71
2
2
24
1.08
19648--19739
28
3.4
27
81
11
100
73
1
1
23
0.96
19655--19754
8
12.4
8
74
16
73
74
2
1
23
0.99
19655--19754
16
5.7
17
75
17
82
74
2
1
23
0.99
19655--19750
14
6.7
14
70
20
58
73
2
1
22
0.99
19648--19751
17
6.4
15
74
11
73
75
1
0
22
0.97
19692--19772
41
2.0
42
80
11
96
71
2
2
23
1.10
22492--22531
21
1.9
21
89
0
62
60
5
2
32
1.32
30502--30594
48
2.0
48
83
6
120
63
3
2
31
1.22
30579--30740
8
20.1
8
68
19
79
72
1
2
23
1.07
30646--30756
3
38.3
3
72
20
60
72
0
1
24
0.99
30640--30741
23
4.3
23
71
23
79
75
0
0
22
0.92
30646--30740
30
3.3
29
76
21
103
75
1
1
22
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30645--30758
32
3.5
31
75
14
81
72
0
1
24
0.99
40841--40942
31
3.3
31
95
0
186
39
21
18
20
1.93
45189--45267
3
26.7
3
97
2
151
67
0
32
0
0.91
45957--46507
198
2.8
197
79
7
526
33
10
20
35
1.86
48055--48289
80
2.9
80
85
2
312
41
8
10
38
1.71
48503--48588
35
2.4
36
79
11
97
33
8
31
26
1.86
53370--53444
35
2.1
35
85
4
98
45
18
0
36
1.50
57934--58002
18
3.6
18
70
14
57
46
23
0
30
1.53
58228--58277
25
2.0
26
88
4
75
54
4
8
34
1.49
58269--58308
18
2.2
19
86
13
57
62
2
2
32
1.22
58543--58576
16
2.1
16
100
0
68
55
26
11
5
1.58
58640--58682
16
2.7
16
88
0
68
60
20
9
9
1.55
58636--58688
22
2.5
20
77
16
54
60
18
9
11
1.57
59410--59440
14
2.2
14
94
0
53
54
22
12
9
1.67
59404--59451
24
2.0
24
95
0
87
54
22
12
10
1.68

Tables:   1

The End!