Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001963.1 Hibiscus syriacus cultivar Beakdansim tig00003967_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56461

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2219--2260
21
2.0
21
90
0
66
9
28
38
23
1.86
2647--2677
14
2.2
14
100
0
62
35
22
0
41
1.54
7659--7706
21
2.3
21
92
0
78
25
14
14
45
1.83
9222--9273
27
1.9
27
84
0
68
19
5
38
36
1.76
11409--11628
106
2.1
105
88
1
323
43
12
7
36
1.71
14189--14261
27
2.8
26
79
6
67
47
23
5
23
1.72
23852--23909
29
2.2
26
81
12
64
46
6
13
32
1.70
30731--30755
6
4.2
6
100
0
50
36
32
0
32
1.58
30752--30794
6
7.2
6
100
0
86
34
48
16
0
1.46
36346--36399
22
2.5
22
78
0
63
38
22
9
29
1.85
36674--36740
6
11.2
6
93
0
107
29
49
16
4
1.65
36738--36781
5
8.8
5
94
0
61
13
38
40
6
1.71
42625--42649
6
4.2
6
100
0
50
36
32
0
32
1.58
42646--42700
6
9.2
6
100
0
110
34
49
16
0
1.46
45109--45165
29
2.0
29
82
6
71
14
31
29
24
1.94
45219--45303
29
2.9
29
89
0
125
12
32
30
23
1.92
45419--45505
29
3.0
29
89
0
129
24
26
34
14
1.94
50039--50078
20
2.0
21
90
5
64
30
10
5
55
1.54
53537--53597
21
3.2
21
65
29
64
31
4
21
42
1.74
53501--53648
35
4.2
36
86
7
180
33
5
18
42
1.73
53497--53648
72
2.2
69
79
11
175
32
5
18
43
1.72

Tables:   1

The End!