Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001967.1 Hibiscus syriacus cultivar Beakdansim tig00003975_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  94565

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5309--5373
27
2.5
28
80
12
75
27
4
7
60
1.44
8604--8685
30
2.7
30
78
0
101
53
10
8
26
1.64
8749--8829
33
2.6
30
86
5
99
62
11
3
22
1.43
8868--8986
59
2.0
59
90
0
184
25
33
22
18
1.97
13000--13033
2
17.0
2
100
0
68
50
0
0
50
1.00
14680--14718
11
3.5
11
80
13
53
56
0
7
35
1.28
14680--14725
22
2.1
22
95
0
83
56
0
10
32
1.34
15415--15468
22
2.5
21
80
11
56
57
1
5
35
1.33
18800--18873
29
2.5
30
97
2
141
28
14
6
50
1.69
24583--24652
31
2.2
32
89
2
106
28
7
27
37
1.83
28243--28276
17
2.0
17
88
0
50
5
11
23
58
1.55
38275--38387
60
1.9
60
87
7
167
33
12
17
36
1.87
39404--39466
2
31.5
2
100
0
126
50
0
49
0
1.00
45577--45615
20
2.0
20
94
0
69
33
17
5
43
1.72
45597--45662
31
2.1
31
88
0
96
34
15
4
45
1.66
47518--47867
141
2.5
141
87
1
468
38
14
14
32
1.87
50080--50126
22
2.1
23
84
11
62
31
12
38
17
1.87
52768--52796
10
2.9
10
100
0
58
0
31
0
68
0.89
54615--54643
4
7.2
4
100
0
58
24
0
24
51
1.48
57165--57211
4
12.0
4
88
4
51
34
0
14
51
1.43
57165--57217
19
2.7
20
91
5
90
35
0
13
50
1.41
58099--58129
2
15.5
2
100
0
62
48
0
0
51
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
67011--67035
2
12.5
2
100
0
50
52
0
0
48
1.00
68520--68564
18
2.6
18
96
3
83
31
31
6
31
1.83
72613--72848
124
1.9
123
82
2
294
48
11
12
27
1.75
77672--77754
32
2.5
34
90
5
134
38
0
0
61
0.96
77689--77742
16
3.4
16
72
10
56
37
0
0
62
0.95
79603--79672
29
2.4
29
95
0
122
17
32
28
21
1.96
79733--79779
14
3.4
14
84
0
58
21
34
34
10
1.88
79828--79911
29
2.9
29
98
0
159
22
27
35
14
1.93
86442--86584
44
3.3
42
77
6
153
51
6
16
25
1.68
86552--86610
30
2.0
29
90
3
91
54
3
13
28
1.55
88160--88196
3
12.3
3
94
0
56
40
0
0
59
0.97

Tables:   1

The End!