Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001969.1 Hibiscus syriacus cultivar Beakdansim tig00003978_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42764

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5113--5169
18
3.0
17
77
22
60
31
10
8
49
1.68
5129--5169
21
2.0
21
90
0
64
29
9
9
51
1.67
9509--9557
24
2.0
24
92
0
80
30
12
10
46
1.74
13000--13062
24
2.3
28
79
15
71
6
49
19
25
1.71
13852--13905
6
8.7
6
90
8
72
37
0
12
50
1.41
17785--17879
45
2.1
45
94
0
163
30
28
10
30
1.90
19097--19148
20
2.7
20
88
8
72
34
23
11
30
1.90
19202--19257
20
2.7
21
89
8
80
26
28
14
30
1.95
19101--19267
62
2.7
61
72
8
153
31
23
11
33
1.91
25911--25974
2
32.0
2
100
0
128
50
0
0
50
1.00
29797--29840
23
1.9
23
90
0
70
52
2
13
31
1.53

Tables:   1

The End!