Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000197.1 Hibiscus syriacus cultivar Beakdansim tig00000350_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55879

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1720--1760
21
2.0
21
100
0
82
9
39
4
46
1.58
14944--15090
74
2.0
74
82
2
179
42
12
19
25
1.86
23743--23779
2
18.5
2
100
0
74
48
0
0
51
1.00
25347--25418
20
3.5
20
73
3
81
30
25
16
27
1.97
25403--25442
21
1.9
21
85
10
55
35
25
22
17
1.95
25342--25439
41
2.4
41
78
13
121
32
23
18
25
1.97
29357--29396
21
1.9
21
89
0
62
27
17
17
37
1.92
33992--34034
22
2.0
22
85
0
59
72
9
4
13
1.26
34364--34410
22
2.0
23
88
8
69
72
0
4
23
1.02
34450--34480
2
15.5
2
100
0
62
51
0
0
48
1.00
35209--35243
17
2.1
17
94
0
61
42
5
25
25
1.77

Tables:   1

The End!