Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001971.1 Hibiscus syriacus cultivar Beakdansim tig00003982_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73901

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
464--513
26
1.9
26
84
8
66
52
0
0
48
1.00
5039--5079
19
2.2
19
100
0
82
41
36
7
14
1.74
12459--12518
31
2.0
31
83
9
79
53
10
6
30
1.60
25828--25879
25
2.1
24
82
10
61
55
1
0
42
1.10
26995--27021
2
13.5
2
100
0
54
51
0
0
48
1.00
28393--28629
121
2.0
121
96
0
438
32
16
19
32
1.94
32605--32642
3
12.7
3
89
10
60
28
2
0
68
1.03
32598--32651
15
3.5
15
83
16
67
24
7
0
68
1.15
35069--35146
31
2.5
32
87
10
108
35
0
0
64
0.94
43488--43523
2
18.0
2
100
0
72
50
0
0
50
1.00
44776--44924
75
2.0
74
83
8
187
46
10
15
27
1.79
46811--46846
18
2.1
18
89
5
56
55
0
2
41
1.14
46807--46847
18
2.3
18
82
0
55
58
0
2
39
1.11
49696--49990
159
1.9
160
84
5
400
35
6
7
50
1.56
58842--58998
60
2.6
60
79
13
171
41
5
22
31
1.75
60110--60187
42
1.9
42
89
5
124
20
17
21
39
1.92
60116--60179
21
3.1
21
67
20
55
20
17
21
40
1.91
60811--60841
6
5.2
6
92
0
53
19
0
48
32
1.49
60921--61012
21
4.3
21
73
13
80
34
21
21
21
1.97
60936--61011
21
3.6
21
76
13
84
34
25
21
19
1.96
60922--61005
42
2.0
42
97
0
159
35
22
20
21
1.96
61020--61092
21
3.5
21
77
17
89
21
24
24
28
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61018--61095
41
1.9
41
97
0
147
24
24
23
28
2.00
72367--72401
16
2.2
16
90
5
54
17
11
17
54
1.71

Tables:   1

The End!