Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001977.1 Hibiscus syriacus cultivar Beakdansim tig00004012_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  82504

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4760--4813
19
2.8
19
77
8
56
31
11
9
48
1.70
7511--7553
23
1.9
21
81
13
50
34
13
18
32
1.90
9973--10028
24
2.3
24
93
0
94
32
19
16
32
1.94
11505--11589
11
7.2
11
69
22
57
30
36
4
28
1.78
11502--11606
36
2.9
36
94
1
176
29
36
5
28
1.80
12043--12087
14
2.9
15
83
12
56
73
6
20
0
1.05
16972--17026
16
3.4
16
81
18
69
16
18
0
65
1.27
16992--17044
25
2.1
25
83
13
65
16
16
0
66
1.26
20450--20500
20
2.6
20
90
3
77
35
15
5
43
1.71
24637--24686
19
2.6
19
84
12
66
36
16
6
42
1.72
24637--24684
20
2.5
19
89
3
69
35
14
6
43
1.71
28804--28854
20
2.6
20
90
3
77
35
15
5
43
1.71
32028--32073
16
2.8
16
86
6
56
65
0
19
15
1.28
32795--32826
16
2.0
16
100
0
64
31
18
6
43
1.75
34240--34329
5
18.8
5
74
17
84
75
2
21
1
0.97
34240--34322
8
9.9
8
75
22
73
74
2
21
1
1.00
34281--34329
16
3.1
16
97
2
91
77
0
22
0
0.77
34240--34337
27
3.6
27
79
9
103
74
2
22
1
0.98
36431--36462
16
2.0
16
100
0
64
31
18
6
43
1.75
38097--38147
21
2.5
21
90
6
79
47
7
11
33
1.69
41416--41466
13
3.8
13
80
15
50
3
19
1
74
1.07
41474--41507
17
1.9
18
94
5
61
0
23
5
70
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41814--41840
14
1.9
14
100
0
54
51
7
29
11
1.64
57404--57455
24
2.2
24
82
0
59
28
21
19
30
1.97
61176--61208
11
3.0
11
90
0
57
9
18
21
51
1.73
61629--61683
27
2.0
27
96
0
101
65
9
16
9
1.46
64768--64800
11
3.0
11
90
0
57
9
18
21
51
1.73
74163--74213
20
2.6
20
90
3
77
35
15
5
43
1.71
78318--78364
19
2.5
19
89
6
69
36
14
6
42
1.72
82456--82492
19
1.9
19
88
0
56
37
18
5
37
1.74
82456--82504
20
2.5
19
86
3
62
34
16
6
42
1.73

Tables:   1

The End!