Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001979.1 Hibiscus syriacus cultivar Beakdansim tig00004021_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51071

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
705--771
32
2.1
32
83
10
84
31
1
35
31
1.67
4067--4114
24
2.0
24
84
4
62
62
0
22
14
1.32
4710--4808
33
2.9
33
78
11
78
29
2
36
32
1.69
18428--18494
32
2.1
33
81
13
77
59
0
23
16
1.37
18984--19025
19
2.2
19
86
0
57
47
7
14
30
1.71
27332--27389
28
2.2
26
81
12
64
8
20
3
67
1.33
27423--27453
15
2.0
16
93
6
55
0
16
0
83
0.64
28213--28263
19
2.6
20
87
3
68
45
5
15
33
1.71
31374--31429
28
2.0
28
89
0
85
26
17
10
44
1.82
31454--31508
28
2.0
28
96
0
101
29
18
9
43
1.80
31374--31535
81
2.0
80
91
1
261
28
22
9
39
1.86
32456--32513
26
2.2
26
90
0
98
18
12
24
44
1.84
32775--32839
27
2.4
27
89
2
103
73
7
6
12
1.23
45111--45244
28
4.9
28
68
14
109
28
19
10
41
1.84
45111--45271
80
2.0
80
91
0
259
28
21
10
39
1.87
46972--47023
21
2.6
20
90
6
79
36
13
5
44
1.68
47564--47608
11
4.1
11
82
5
56
71
4
11
13
1.29
47564--47605
22
1.9
22
90
9
68
69
4
11
14
1.34

Tables:   1

The End!