Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001990.1 Hibiscus syriacus cultivar Beakdansim tig00004068_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42502

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2493--2541
20
2.4
21
93
6
84
16
16
12
55
1.70
2592--3060
221
2.1
222
94
3
822
40
8
7
44
1.62
5253--5313
3
20.7
3
93
3
106
34
1
0
63
1.04
5779--5829
24
2.1
24
85
7
68
68
5
21
3
1.27
6610--6661
19
2.9
18
86
8
70
17
3
5
73
1.19
6701--6735
12
2.8
13
91
8
56
42
0
0
57
0.99
7454--7490
15
2.7
15
88
12
53
24
5
8
62
1.44
19224--19405
84
2.2
83
93
4
303
28
14
21
35
1.93
20115--20781
113
5.9
113
95
0
1149
37
12
20
29
1.89
21095--21165
3
23.7
3
94
0
124
33
1
1
63
1.12
21631--21682
24
2.1
25
86
10
72
69
5
21
3
1.26
22474--22522
19
2.7
18
87
9
73
16
4
6
73
1.19
22562--22596
12
2.8
13
91
8
56
42
0
0
57
0.99
23833--23919
24
3.7
24
92
1
140
27
14
13
43
1.84
23823--23919
24
3.9
24
89
4
131
26
14
13
45
1.82
24190--24237
24
2.0
24
83
0
60
47
18
10
22
1.79
24225--24277
22
2.4
22
100
0
106
39
18
20
20
1.92
26027--26080
22
2.5
22
82
5
67
31
25
20
22
1.98
26348--26402
22
2.6
22
82
5
69
34
20
18
27
1.95
32270--32316
2
23.5
2
100
0
94
48
0
0
51
1.00

Tables:   1

The End!