Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001995.1 Hibiscus syriacus cultivar Beakdansim tig00004085_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62550

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1436--1478
21
2.0
22
82
13
54
44
9
6
39
1.64
3955--3980
3
8.7
3
100
0
52
30
0
0
69
0.89
11638--11718
28
2.9
29
76
20
82
39
18
8
33
1.81
12640--12688
24
2.0
24
100
0
98
30
20
12
36
1.89
17937--17996
30
2.0
30
100
0
120
60
13
6
20
1.55
20701--20770
30
2.4
29
78
4
77
48
2
1
47
1.25
26617--26661
12
3.8
12
82
5
65
33
26
22
17
1.96
32915--32943
15
2.0
15
93
6
51
55
6
0
37
1.27
33641--33700
31
2.0
31
90
3
95
50
13
8
28
1.70
36182--36213
2
16.0
2
100
0
64
50
0
0
50
1.00
40451--40614
59
2.8
60
87
3
233
35
21
3
39
1.71
40451--40678
60
3.8
58
81
9
221
34
22
4
38
1.74
48521--48570
22
2.3
23
79
10
59
48
6
8
38
1.57
49304--49351
21
2.3
21
88
0
69
33
0
0
66
0.92
49352--49404
22
2.4
22
81
6
63
30
0
5
64
1.17
49344--49400
22
2.6
21
76
15
53
33
0
5
61
1.18
50741--51008
133
2.0
133
89
1
412
32
18
16
32
1.93

Tables:   1

The End!