Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000200.1 Hibiscus syriacus cultivar Beakdansim tig00000357_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60479

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1962--2079
21
5.6
22
82
9
131
27
27
25
18
1.98
1962--2079
63
1.9
62
84
5
157
27
27
25
18
1.98
8939--9058
22
5.5
22
86
0
177
29
30
25
15
1.95
14151--14196
2
22.5
2
95
4
83
47
0
2
50
1.13
14249--14285
2
18.5
2
100
0
74
51
0
0
48
1.00
14303--14470
85
2.0
85
80
6
189
31
17
20
30
1.96
14454--14496
13
3.3
13
86
0
59
37
16
18
27
1.92
20636--20709
24
3.1
24
90
0
76
43
18
13
24
1.86
23182--23220
18
2.2
18
95
0
69
12
23
48
15
1.79
23176--23205
13
2.3
13
94
0
51
16
23
43
16
1.87
24036--24155
60
2.0
61
96
1
224
45
10
19
25
1.80
24885--24932
22
2.2
22
84
0
60
10
2
22
64
1.35
32008--32051
23
2.0
21
86
8
61
75
2
0
22
0.92
32268--32446
70
2.6
70
93
0
304
54
15
12
17
1.71
33885--34030
73
2.0
73
93
0
247
43
1
17
37
1.58
39131--39170
15
2.7
14
88
7
53
50
2
2
45
1.28
39595--39662
28
2.4
28
95
2
118
11
39
2
45
1.56
42741--42767
4
6.8
4
100
0
54
74
0
0
25
0.83
52856--53002
74
2.0
74
82
2
179
42
12
19
25
1.86
57568--57604
19
1.9
20
94
5
67
40
5
10
43
1.63

Tables:   1

The End!