Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002001.1 Hibiscus syriacus cultivar Beakdansim tig00004093_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75626

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6311--6357
17
2.7
18
96
3
87
34
6
4
55
1.45
11642--11680
19
2.1
19
100
0
78
43
5
0
51
1.24
11644--11692
19
2.5
19
90
3
71
38
6
4
51
1.46
15861--15937
26
2.8
26
77
14
75
35
3
1
59
1.24
19300--19341
22
2.0
21
86
9
59
26
23
26
23
2.00
31695--31742
21
2.2
23
88
7
73
41
6
18
33
1.76
41647--41687
19
2.3
17
83
8
55
68
0
0
31
0.90
47759--47800
12
3.3
12
81
12
57
42
2
2
52
1.27
49932--49979
21
2.3
21
82
10
62
33
16
20
29
1.95
50817--50856
20
2.0
20
95
0
71
35
22
15
27
1.94
51594--51742
60
2.5
60
80
2
147
31
24
5
38
1.78
55439--55468
3
10.0
3
100
0
60
33
33
0
33
1.58
55467--55528
3
21.3
3
93
6
110
35
0
0
64
0.94
61680--61716
20
1.9
18
89
10
56
43
0
0
56
0.99
61694--61749
26
2.2
26
83
6
69
37
0
3
58
1.15
61866--61922
27
2.2
26
82
14
66
49
1
0
49
1.11
61884--61962
27
3.0
24
72
15
68
48
2
2
46
1.29
61884--62076
53
3.6
52
73
12
126
48
1
1
48
1.20
62028--62074
22
2.1
23
88
4
69
53
0
0
46
1.00
62031--62085
22
2.5
22
79
5
58
50
1
0
47
1.11
64660--64713
23
2.3
24
93
3
92
42
0
11
46
1.39
64956--65019
23
2.8
23
92
0
110
45
7
6
40
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64957--65019
11
5.5
11
72
7
54
44
7
6
41
1.59
65773--65823
15
3.3
15
71
15
50
50
3
3
41
1.39
65759--65900
53
2.6
56
85
6
175
49
7
4
39
1.49
65821--65881
21
3.0
20
83
7
61
47
4
4
42
1.46
65758--65916
57
2.9
54
85
6
187
47
6
4
40
1.50
65891--65919
14
2.0
15
93
6
51
37
6
6
48
1.57
65919--65987
22
3.1
22
78
17
79
44
5
7
42
1.56
65936--65989
24
2.2
25
80
9
67
46
5
7
40
1.55
65967--66000
13
2.5
13
90
4
50
41
2
8
47
1.50
65923--66063
57
2.5
56
87
8
196
43
7
6
43
1.57
65925--66026
20
5.3
20
72
8
79
43
5
6
44
1.55
66003--66080
37
2.2
36
93
4
131
43
10
5
41
1.61
66194--66238
21
2.2
20
84
11
56
26
0
28
44
1.55
66278--66339
19
3.2
19
83
2
79
40
3
8
48
1.49
66265--66310
23
2.0
23
86
0
65
39
2
8
50
1.46
66549--66595
18
2.6
18
86
6
60
48
2
4
44
1.34
66546--66624
32
2.5
31
78
8
81
48
1
3
46
1.28
66750--66808
15
4.1
15
72
14
52
49
6
0
44
1.29
66866--66902
2
19.0
2
94
5
67
48
0
0
51
1.00

Tables:   1

The End!