Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002004.1 Hibiscus syriacus cultivar Beakdansim tig00004099_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56212

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6591--6649
23
2.8
20
73
14
55
18
5
10
66
1.40
19325--19387
23
2.7
24
80
9
67
36
3
3
57
1.31
20528--20679
77
2.0
77
90
2
243
38
9
7
44
1.65
37986--38258
21
13.1
20
77
11
191
29
21
24
24
1.99
38006--38078
20
3.6
20
78
10
94
34
19
23
23
1.97
37986--38183
41
4.8
42
79
10
194
29
21
24
24
1.99
39007--39130
21
5.8
22
74
16
127
36
23
20
20
1.95
39003--39139
42
3.3
42
94
0
247
35
24
19
20
1.96
39000--39139
21
6.7
19
74
16
109
35
23
20
21
1.96
41320--41392
27
2.7
27
93
0
119
43
13
20
21
1.86
41327--41372
14
3.4
14
71
17
51
52
8
19
19
1.72
45004--45034
9
3.4
9
90
0
53
25
0
0
74
0.82
47772--47811
20
2.0
20
85
9
55
37
2
0
60
1.11

Tables:   1

The End!