Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002006.1 Hibiscus syriacus cultivar Beakdansim tig00004103_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62592

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2428--2535
6
18.0
6
97
0
117
29
60
3
6
1.39
2975--3279
151
2.0
149
88
5
456
42
9
6
41
1.62
6527--6948
55
7.8
55
81
4
396
29
23
14
32
1.94
28171--28200
10
3.1
10
95
4
53
20
10
20
50
1.76
29281--29343
17
3.6
17
87
4
90
28
25
9
36
1.87
35282--35319
2
19.5
2
94
5
69
47
0
0
52
1.00
42446--42490
23
1.9
24
86
4
65
66
4
2
26
1.22
44315--44375
2
30.5
2
100
0
122
49
0
0
50
1.00
49650--49693
21
2.0
22
83
12
56
36
11
4
47
1.60
52881--53015
60
2.3
59
79
5
148
36
12
5
45
1.67
53140--53275
59
2.3
60
81
1
166
58
2
5
33
1.37

Tables:   1

The End!