Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002009.1 Hibiscus syriacus cultivar Beakdansim tig00004107_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65925

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2942--3293
54
6.5
54
89
1
490
29
18
17
34
1.94
5375--5411
18
2.0
18
89
5
56
70
0
0
29
0.88
11018--11061
19
2.4
18
85
7
61
70
0
4
25
1.06
11860--11962
53
2.0
52
82
5
127
57
9
5
27
1.54
16831--16873
18
2.4
18
92
0
68
72
0
6
20
1.08
23236--23402
90
1.8
92
88
5
259
28
22
26
22
1.99
24737--24804
27
2.5
27
81
11
84
20
13
20
45
1.84
25697--25753
23
2.5
23
88
0
87
31
21
24
22
1.98
36481--36527
14
3.4
14
84
0
58
25
12
29
31
1.93
40519--40806
45
6.4
45
88
1
398
30
19
9
40
1.83
40519--40843
90
3.6
90
86
2
420
29
20
9
39
1.85
41253--41306
22
2.6
20
81
16
65
24
31
12
31
1.93
41253--41470
95
2.3
95
80
6
237
28
24
14
32
1.94
41364--41406
22
2.0
22
85
0
59
30
16
13
39
1.87
42538--42591
2
27.0
2
100
0
108
50
0
0
50
1.00
42981--43046
31
2.1
31
88
0
96
30
15
16
37
1.90
45714--45761
19
2.5
20
82
3
53
50
2
14
33
1.55
49823--49973
64
2.3
63
84
8
189
37
13
18
31
1.89
49780--49968
32
5.9
32
75
2
137
35
13
17
32
1.89

Tables:   1

The End!