Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000201.1 Hibiscus syriacus cultivar Beakdansim tig00000360_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46860

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51--123
23
3.2
23
81
9
80
23
26
21
28
1.99
146--188
21
2.0
21
86
8
61
34
18
23
23
1.96
2655--2690
16
2.2
16
90
0
54
30
22
0
47
1.52
3140--3212
31
2.4
31
88
0
110
34
26
17
21
1.96
3140--3235
31
3.1
31
84
3
95
35
23
18
21
1.96
4041--4086
23
2.0
22
83
4
56
41
10
8
39
1.71
9179--9221
21
2.0
21
86
8
61
32
16
25
25
1.96
9676--9703
14
2.0
14
100
0
56
64
0
28
7
1.20
16232--16305
29
2.5
30
89
8
116
54
1
6
37
1.36
17968--18017
21
2.4
21
100
0
100
50
0
4
46
1.20
25806--25968
72
2.2
73
90
4
258
46
11
19
23
1.82
25934--25980
21
2.2
21
84
0
67
42
14
14
27
1.86
25808--26004
72
2.7
70
81
10
175
49
11
16
22
1.77
33113--33369
127
2.0
128
95
0
462
34
19
10
35
1.85
34594--34663
23
3.0
23
80
14
65
55
0
1
42
1.08
36131--36183
19
2.8
19
100
0
106
30
16
30
22
1.96
42564--42612
21
2.4
21
96
3
91
30
14
10
44
1.78
44675--44761
43
2.0
43
93
0
147
33
13
22
29
1.93

Tables:   1

The End!