Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002013.1 Hibiscus syriacus cultivar Beakdansim tig00004113_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71026

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8001--8061
30
2.0
30
96
0
113
52
3
21
22
1.61
12917--13070
54
2.9
54
87
3
220
33
18
21
26
1.96
20955--20995
21
2.0
21
85
0
55
4
26
19
48
1.69
21660--21707
25
1.9
25
86
0
69
39
0
4
56
1.19
31335--31374
2
20.0
2
94
0
71
2
47
0
50
1.14
39762--39790
2
14.5
2
100
0
58
51
0
0
48
1.00
44475--44521
2
24.0
2
95
4
87
0
51
0
48
1.00
46315--46350
15
2.4
15
90
0
54
38
8
22
30
1.83
46710--46754
23
2.0
23
90
0
72
44
0
2
53
1.13
46711--46760
23
2.2
23
85
0
64
48
0
2
50
1.12
46870--46973
43
2.4
43
87
1
138
53
15
11
19
1.71
56602--56642
17
2.5
17
92
4
66
21
0
0
78
0.76
58401--58434
18
1.9
18
88
5
52
26
32
26
14
1.95
62247--62294
2
24.5
2
95
4
89
50
0
0
50
1.00
62907--62952
17
2.7
17
96
0
83
34
0
23
41
1.55
63931--64079
76
2.0
76
97
0
280
34
9
18
37
1.83

Tables:   1

The End!