Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002018.1 Hibiscus syriacus cultivar Beakdansim tig00004122_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52754

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4909--4938
14
2.1
14
100
0
60
36
0
6
56
1.26
12649--12709
23
2.7
23
89
0
86
26
24
27
21
1.99
12919--12987
30
2.3
30
89
0
102
33
21
4
40
1.73
13329--13421
20
4.7
20
95
0
168
29
32
17
21
1.96
13430--13535
56
1.9
55
84
1
140
23
16
22
36
1.94
21081--21130
22
2.2
22
79
10
57
32
30
28
10
1.89
21486--21542
20
2.7
22
78
15
66
43
5
14
36
1.67
22075--22167
31
3.0
31
98
1
179
19
19
23
37
1.94
34537--34571
2
17.5
2
100
0
70
51
0
0
48
1.00
39099--39131
17
1.9
17
88
11
50
45
0
12
42
1.41
44901--45000
40
2.5
40
91
0
164
41
5
13
41
1.65
46276--46348
28
2.7
28
95
4
132
67
9
16
6
1.40
49815--49858
21
2.0
22
91
4
72
38
6
0
54
1.27
51616--51684
35
2.0
34
94
5
122
30
14
28
26
1.95

Tables:   1

The End!