Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002021.1 Hibiscus syriacus cultivar Beakdansim tig00004130_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48373

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2361--2420
31
1.9
31
87
12
88
28
10
5
56
1.53
5764--5803
20
2.0
20
90
0
62
45
5
5
45
1.47
6321--6366
18
2.6
17
82
3
56
36
4
30
28
1.76
6891--7005
28
3.6
30
75
19
108
44
33
9
12
1.74
7353--7397
22
2.0
22
100
0
90
51
8
4
35
1.54
14765--14793
2
14.5
2
100
0
58
51
0
0
48
1.00
15197--15246
25
2.0
25
92
0
82
34
12
22
32
1.90
17729--17819
46
2.0
46
95
0
164
39
10
7
41
1.69
21576--21615
19
2.1
19
85
0
53
35
5
5
55
1.44
27881--27924
23
2.0
22
86
13
63
22
6
4
65
1.35
34153--34204
18
2.9
19
88
5
65
21
11
34
32
1.89
34153--34199
6
7.8
6
76
9
51
19
12
36
31
1.89
34275--34310
7
5.1
7
100
0
72
27
0
58
13
1.36
39755--40001
127
1.9
127
96
0
458
31
29
5
32
1.80

Tables:   1

The End!