Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002023.1 Hibiscus syriacus cultivar Beakdansim tig00004132_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70086

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9883--9955
18
3.9
18
80
7
92
28
31
19
20
1.97
9882--9958
38
2.0
38
89
0
118
28
29
19
22
1.98
10589--10640
19
2.7
19
90
0
86
19
30
17
32
1.95
17569--17617
22
2.2
22
82
7
64
32
30
28
8
1.86
18311--18528
103
2.1
103
96
0
400
26
13
23
36
1.92
18545--18677
23
5.7
23
83
1
149
21
26
24
27
2.00
18535--18679
47
3.1
47
85
2
193
23
24
22
29
1.99
24148--24365
103
2.1
103
96
0
400
25
13
23
37
1.91
24372--24491
47
2.6
47
91
1
188
25
22
21
30
1.99
24372--24493
23
5.2
24
71
5
88
26
22
21
30
1.99
24389--24496
23
4.7
23
76
2
108
24
24
23
28
1.99
26038--26087
19
2.6
19
93
0
82
22
32
16
30
1.95
28664--28913
108
2.3
107
87
4
353
38
20
18
23
1.93
37120--37213
10
9.8
9
74
13
71
18
26
26
28
1.98
37121--37219
29
3.4
28
86
5
117
17
28
26
28
1.97
37120--37217
19
5.1
19
79
13
92
18
26
26
28
1.98
37121--37219
9
10.3
9
77
12
81
17
28
26
28
1.97
37216--37272
5
10.8
5
75
17
53
19
50
22
7
1.71
37216--37279
22
3.0
22
97
2
121
18
48
23
9
1.77
44464--44496
17
1.9
17
100
0
66
18
48
24
9
1.76
48328--48434
48
2.2
48
96
0
196
28
17
19
34
1.95
50254--50299
2
23.5
2
95
4
85
47
0
0
52
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57441--57492
27
2.0
26
85
7
70
36
1
1
59
1.19
59465--59498
5
6.8
5
86
0
50
79
2
0
17
0.86
59462--59520
25
2.4
25
83
13
77
72
5
3
18
1.17
60675--60733
11
5.4
11
74
13
50
1
15
10
72
1.18
60679--60730
24
2.2
23
86
6
68
1
13
7
76
1.07
60679--60724
11
3.6
13
80
14
51
2
15
8
73
1.16
62074--62131
15
3.7
15
76
17
64
63
0
1
34
1.04
62082--62133
11
4.8
11
77
13
54
63
0
1
34
1.06
63132--63527
203
1.9
204
89
1
607
23
21
20
35
1.96
66562--66612
23
2.3
22
90
6
77
41
1
0
56
1.10
66584--66707
31
4.2
30
74
10
103
39
4
0
56
1.18
66584--66674
31
2.9
31
85
8
105
37
4
0
58
1.18
66745--66826
25
3.4
24
74
17
71
50
0
3
46
1.19
66767--66828
24
2.6
25
74
7
65
51
0
4
43
1.23
70026--70065
20
2.0
20
90
0
62
25
22
22
30
1.99

Tables:   1

The End!