Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002024.1 Hibiscus syriacus cultivar Beakdansim tig00004133_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76685

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
82--150
23
3.2
21
75
16
70
44
1
1
52
1.19
82--156
20
3.5
20
75
21
73
46
1
2
49
1.24
197--236
18
2.2
18
86
8
55
47
2
2
47
1.29
9686--9743
31
1.9
30
85
3
80
36
1
22
39
1.64
13895--14324
170
2.5
168
82
7
501
35
18
20
26
1.95
26926--26950
2
12.5
2
100
0
50
48
0
0
52
1.00
30160--30232
30
2.4
30
95
0
128
21
19
26
32
1.97
30464--30502
17
2.4
17
95
4
71
43
0
5
51
1.24
32026--32089
23
2.7
23
82
4
74
40
3
4
51
1.38
32072--32175
29
3.6
29
76
17
92
50
2
0
46
1.23
32131--32228
52
1.9
51
89
6
153
50
3
1
45
1.24
32199--32247
21
2.3
20
80
13
53
53
0
0
46
1.00
32131--32225
27
3.6
27
71
20
92
50
3
1
45
1.24
32438--32464
14
1.9
14
100
0
54
37
22
22
18
1.95
36551--36585
2
17.5
2
93
0
61
51
0
0
48
1.00
36950--37011
21
3.0
21
90
2
72
32
9
8
50
1.65
36963--37011
21
2.4
21
96
3
91
28
8
8
55
1.58
38310--38345
18
1.9
18
88
5
54
47
5
0
47
1.25
40672--40706
2
18.0
2
94
5
63
48
0
0
51
1.00
46090--46120
2
15.5
2
100
0
62
51
0
0
48
1.00
51842--51876
2
17.5
2
100
0
70
48
0
0
51
1.00
61575--61625
19
2.6
19
74
20
52
45
9
5
39
1.62
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61576--61646
31
2.2
32
82
2
90
46
9
5
38
1.61
66452--66480
2
15.0
2
92
7
51
48
0
0
51
1.00
70694--70724
12
2.7
11
90
9
53
35
0
0
64
0.94
71292--71336
21
2.1
21
84
8
56
53
2
0
44
1.13
71284--71338
26
2.0
29
89
10
89
52
1
0
45
1.11
71304--71343
21
1.9
21
84
0
53
55
0
2
42
1.13

Tables:   1

The End!