Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002025.1 Hibiscus syriacus cultivar Beakdansim tig00004136_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  90868

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
229--278
13
4.2
13
80
15
54
64
2
2
32
1.16
2353--2397
4
11.8
4
77
17
51
28
0
71
0
0.87
2349--2406
26
2.2
26
87
6
91
34
0
65
0
0.93
2348--2405
30
1.9
30
92
0
98
34
0
65
0
0.93
3909--3943
16
2.2
16
89
0
52
54
28
8
8
1.60
3913--3956
16
2.8
16
89
0
61
47
36
9
6
1.62
8750--8789
18
2.2
18
86
4
53
42
0
0
57
0.98
9130--9172
20
2.2
20
84
12
54
41
2
0
55
1.12
36619--36645
4
6.8
4
100
0
54
25
0
25
48
1.52
38306--38335
15
2.0
15
93
0
51
43
0
0
56
0.99
38232--38349
43
2.8
42
79
5
139
48
1
0
49
1.17
49616--49662
18
2.6
18
82
0
58
4
29
17
48
1.65
49672--49708
18
2.1
18
89
0
56
8
29
16
45
1.76
49672--49783
48
2.3
48
79
0
125
7
32
16
43
1.75
49728--49865
30
4.6
30
88
0
186
3
31
21
42
1.70
51918--51951
17
1.9
17
88
5
50
38
0
0
61
0.96
56251--56280
12
2.5
12
88
0
51
40
0
0
60
0.97
64357--64489
44
3.0
44
96
1
241
36
8
6
48
1.60
71707--71781
39
1.9
39
94
0
132
30
16
13
40
1.86
78405--78448
2
22.0
2
100
0
88
50
0
0
50
1.00
79280--79337
29
2.2
24
82
17
64
29
13
10
46
1.77
83962--84020
29
2.0
29
100
0
118
23
13
13
49
1.78

Tables:   1

The End!