Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002027.1 Hibiscus syriacus cultivar Beakdansim tig00004139_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64794

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9397--9570
90
2.0
89
90
3
280
40
9
4
45
1.55
9532--9600
20
3.2
20
71
16
59
52
2
1
43
1.25
19985--20025
16
2.6
16
88
3
57
36
7
21
34
1.82
23799--25379
787
2.0
786
99
0
3099
35
19
15
29
1.93
32140--32320
60
3.0
60
79
1
175
32
17
6
44
1.73
40120--40182
27
2.3
27
86
0
90
41
14
14
30
1.85
49576--50430
8
107.5
8
98
1
1603
25
11
25
38
1.89
56385--56471
41
2.1
41
85
6
115
18
12
18
50
1.77
56793--56883
27
3.4
26
74
15
78
48
1
1
49
1.15
56809--56890
27
3.1
27
75
18
82
48
1
1
48
1.17
56903--56946
22
2.0
22
86
4
61
54
2
2
40
1.25
56961--57056
33
2.8
35
73
16
85
47
4
0
47
1.21
63242--63268
13
2.1
13
100
0
54
14
11
7
66
1.43

Tables:   1

The End!