Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002043.1 Hibiscus syriacus cultivar Beakdansim tig00004164_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71997

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5967--6208
120
2.0
120
100
0
484
35
23
12
28
1.91
9970--10021
26
2.0
26
100
0
104
34
3
15
46
1.64
11674--11703
16
1.9
15
93
6
51
43
13
10
33
1.77
19680--19768
43
2.1
43
100
0
178
33
19
15
31
1.93
23461--23515
24
2.3
24
96
0
101
32
14
21
30
1.93
29057--29117
29
2.1
29
87
6
88
40
18
19
21
1.91
30109--30169
23
2.7
23
84
0
77
47
11
8
32
1.69
30212--30259
19
2.4
19
75
10
51
64
10
0
25
1.25
31300--31345
24
1.9
24
90
0
74
43
2
15
39
1.59
33380--33416
16
2.3
16
95
0
65
56
18
5
18
1.60
37387--37416
2
15.0
2
100
0
60
50
0
0
50
1.00
47751--47826
35
2.2
35
87
0
107
38
23
1
36
1.64
48223--48470
130
1.9
130
92
0
415
36
15
12
35
1.85
48397--48443
23
2.1
21
84
7
58
36
14
14
34
1.88
48237--48501
130
2.0
129
81
4
300
40
13
12
33
1.83
48935--48968
16
2.0
18
88
11
54
64
5
2
26
1.30
51807--51850
21
2.1
21
100
0
88
13
43
9
34
1.76
52036--52080
22
2.0
23
82
4
56
17
13
17
51
1.77

Tables:   1

The End!