Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002045.1 Hibiscus syriacus cultivar Beakdansim tig00004167_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  83967

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
305--376
29
2.5
29
93
0
117
38
12
9
38
1.76
675--823
67
2.3
67
88
2
212
17
26
28
28
1.98
6792--6836
22
2.0
22
100
0
90
26
26
26
20
1.99
7130--7201
29
2.5
29
93
0
117
38
12
9
38
1.76
7502--7651
68
2.2
68
88
2
214
17
26
28
28
1.98
7502--7673
67
2.6
67
85
5
213
17
26
27
28
1.98
16878--16928
19
2.8
18
80
17
61
41
0
0
58
0.98
16889--16924
17
2.1
17
90
10
56
38
0
0
61
0.96
16884--16933
17
2.8
17
78
6
55
42
0
0
58
0.98
27646--27674
2
14.5
2
100
0
58
48
0
0
51
1.00
35416--35603
92
2.0
93
84
6
247
30
23
15
30
1.95
56251--56280
14
2.1
14
100
0
60
36
0
6
56
1.26
64029--64089
23
2.7
23
92
0
95
26
26
27
19
1.99
64301--64369
30
2.3
30
89
0
102
34
20
4
40
1.72
64712--64804
20
4.7
20
95
0
168
29
32
17
21
1.96
64813--64917
56
1.9
54
82
3
129
23
17
21
37
1.94
72864--72920
20
2.7
22
78
15
66
43
5
14
36
1.67
73447--73540
31
3.0
31
100
0
188
19
19
23
38
1.93

Tables:   1

The End!