Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002048.1 Hibiscus syriacus cultivar Beakdansim tig00004172_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60253

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8795--8841
5
9.4
5
100
0
94
78
0
0
21
0.75
9045--9094
25
2.0
25
84
7
66
52
0
2
46
1.12
10896--10925
2
15.5
2
93
6
53
50
0
0
50
1.00
12488--12535
2
24.0
2
100
0
96
50
0
0
50
1.00
14208--14233
2
13.0
2
100
0
52
50
0
0
50
1.00
15751--15787
2
18.5
2
100
0
74
51
0
0
48
1.00
16227--16251
2
12.5
2
100
0
50
52
0
0
48
1.00
40447--40488
14
2.9
15
79
13
52
45
0
2
52
1.13
43630--43655
2
13.0
2
100
0
52
50
0
0
50
1.00
43987--44138
74
2.1
74
91
0
241
35
19
19
26
1.95
46310--46435
60
2.1
60
82
5
157
42
4
22
30
1.74
46324--46455
60
2.2
60
81
8
144
40
4
21
33
1.73
46650--46689
20
2.0
20
95
4
73
42
5
22
30
1.75
52787--52843
21
2.7
21
84
12
73
61
10
12
15
1.57
54133--54175
18
2.4
18
100
0
86
16
20
27
34
1.94

Tables:   1

The End!