Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002050.1 Hibiscus syriacus cultivar Beakdansim tig00004176_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46642

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4349--4460
30
3.7
30
85
3
145
19
2
37
40
1.66
4950--4988
17
2.4
17
95
4
71
43
0
5
51
1.24
9588--9617
15
2.0
15
93
0
51
56
0
26
16
1.40
14119--14155
19
1.9
19
88
0
56
62
2
0
35
1.10
14243--14298
24
2.3
25
78
9
71
48
7
0
44
1.30
14542--14584
20
2.2
20
87
8
61
39
0
13
46
1.44
17502--17560
21
2.8
20
80
10
64
30
18
25
25
1.98
18046--18083
18
2.1
18
85
9
51
42
0
0
57
0.98
18070--18139
29
2.4
28
79
9
77
50
0
2
47
1.16
20777--20823
19
2.4
20
82
7
60
31
14
6
46
1.70
24008--46642
7
3311.0
7
94
5
39925
14
0
43
42
1.47

Tables:   1

The End!