Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002052.1 Hibiscus syriacus cultivar Beakdansim tig00004178_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72889

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11375--11529
59
2.6
59
76
14
165
32
20
4
42
1.72
12180--12237
27
2.2
26
93
3
98
48
3
5
43
1.42
12448--12482
14
2.5
14
85
0
52
71
5
0
22
1.07
21993--22041
21
2.3
21
85
0
71
26
40
24
8
1.83
23925--24042
54
2.2
54
89
0
182
33
18
12
35
1.89
25236--25287
27
2.0
26
85
11
70
48
3
1
46
1.31
25872--25896
13
1.9
13
100
0
50
52
0
0
48
1.00
29508--29575
13
5.3
13
76
18
54
61
2
1
33
1.20
29876--29942
31
2.2
31
88
0
98
19
29
11
38
1.88
29977--30036
29
2.1
29
81
6
68
33
8
26
31
1.86
31012--31108
36
2.7
36
88
1
142
41
26
1
30
1.63
31909--31987
35
2.3
35
91
4
124
29
0
26
44
1.55
53667--53718
27
1.9
27
84
7
70
36
3
1
57
1.28
57889--57922
14
2.5
13
85
4
50
41
5
0
52
1.25
57999--58074
23
3.2
24
74
22
70
48
1
1
48
1.18
58313--58370
25
2.3
25
96
0
107
31
3
25
39
1.73
58634--58979
2
178.0
2
67
20
130
44
7
3
44
1.49
58602--58751
79
1.9
77
86
5
212
44
11
4
40
1.59
64026--64067
3
14.0
3
87
0
57
66
0
28
4
1.12
64023--64054
15
2.1
15
100
0
64
59
0
34
6
1.23
71425--71481
3
19.0
3
100
0
114
66
0
0
33
0.92

Tables:   1

The End!