Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002053.1 Hibiscus syriacus cultivar Beakdansim tig00004179_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58312

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3642--3684
21
2.0
21
100
0
86
51
0
39
9
1.34
6216--6244
12
2.5
12
94
5
51
24
0
6
68
1.13
19636--19663
7
4.0
7
100
0
56
14
57
0
28
1.38
20201--20225
13
1.9
13
100
0
50
40
12
0
48
1.40
20370--20444
37
2.1
36
85
7
98
46
1
4
48
1.29
20890--20966
39
2.0
39
84
5
102
31
12
23
32
1.92
23588--23734
60
2.4
59
80
8
145
42
2
21
34
1.64
37691--37726
15
2.4
15
90
0
54
5
19
66
8
1.38
37710--37737
11
2.5
11
100
0
56
7
17
67
7
1.37
38856--38910
2
27.5
2
100
0
110
50
0
0
49
1.00
44087--44182
23
4.2
23
97
0
183
47
4
31
16
1.65
56440--56473
5
6.8
5
100
0
68
41
17
0
41
1.50

Tables:   1

The End!