Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002064.1 Hibiscus syriacus cultivar Beakdansim tig00004208_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55006

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2219--2304
29
3.0
29
70
14
88
47
1
2
48
1.22
2932--2996
6
10.7
6
86
8
78
23
10
66
0
1.23
5061--5088
2
14.0
2
100
0
56
50
0
0
50
1.00
6471--6499
10
2.7
11
94
5
51
75
0
0
24
0.80
11353--11435
33
2.5
33
84
0
103
26
15
26
31
1.96
17765--17814
20
2.5
20
78
12
59
40
2
2
56
1.22
17734--17825
11
9.2
10
67
23
52
40
1
3
55
1.23
17732--17818
31
2.8
30
79
10
95
41
1
3
54
1.25
18543--18630
20
4.4
19
72
20
63
52
2
1
44
1.21
18538--18624
31
2.8
31
79
10
97
54
2
1
42
1.20
18533--18600
19
3.5
20
75
15
63
54
0
2
42
1.15
21184--21319
30
4.6
30
82
4
145
32
50
4
12
1.60
29358--29394
2
19.0
2
94
5
67
51
0
0
48
1.00
35297--35401
31
3.3
32
86
2
142
26
24
13
35
1.93
43314--43364
22
2.3
22
96
0
93
3
29
31
35
1.76
44233--44294
32
1.9
32
90
0
97
33
30
27
8
1.86
51089--51153
19
3.2
19
68
16
58
40
12
6
41
1.67
53901--53943
21
2.1
20
87
12
61
27
6
4
60
1.43

Tables:   1

The End!