Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002068.1 Hibiscus syriacus cultivar Beakdansim tig00004220_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75261

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2516--2605
43
2.1
43
86
8
123
38
11
15
34
1.83
5730--5772
22
1.9
23
85
4
61
39
11
2
46
1.53
6110--6138
2
14.5
2
100
0
58
48
0
0
51
1.00
6719--6749
15
2.1
15
93
0
53
16
25
3
54
1.56
30041--30112
37
2.0
36
94
2
126
41
11
2
44
1.54
30668--30708
17
2.4
17
88
8
57
29
19
21
29
1.98
41833--41864
16
2.0
16
100
0
64
37
6
0
56
1.25
46716--46768
24
2.2
24
82
0
70
56
18
15
9
1.65
47758--47797
16
2.3
19
84
16
52
17
5
10
67
1.37
48090--48114
13
1.9
13
100
0
50
8
36
8
48
1.62
48780--48907
49
2.6
49
93
1
213
25
20
15
39
1.92
67947--67997
27
1.9
26
84
4
66
47
5
9
37
1.61
68545--68604
29
2.0
31
90
6
97
35
6
16
41
1.75
68802--68842
21
2.0
21
95
0
73
24
17
31
26
1.97
68872--68911
20
1.9
21
85
10
55
37
37
10
15
1.80
69126--69195
34
2.1
32
89
5
104
31
15
31
21
1.95

Tables:   1

The End!