Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002075.1 Hibiscus syriacus cultivar Beakdansim tig00004238_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  86929

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4463--4507
22
2.0
22
83
8
56
42
4
2
51
1.34
9564--9653
45
2.0
46
91
4
148
40
14
18
26
1.89
25436--25887
51
8.6
56
89
3
305
28
25
15
29
1.96
25543--25897
51
6.9
51
93
1
557
27
27
15
29
1.96
25436--25901
102
4.4
102
86
5
576
29
25
15
29
1.96
27246--27288
19
2.3
19
88
4
61
4
23
0
72
1.04
27273--27338
18
4.1
16
80
16
66
6
19
1
72
1.13
47027--47159
56
2.4
55
91
2
221
32
18
6
43
1.74
48147--48267
52
2.3
52
86
0
170
21
19
23
36
1.95
52176--52753
55
10.8
55
84
8
547
30
25
15
27
1.96
52149--52753
110
5.6
110
80
10
655
30
25
16
27
1.96
52342--52431
44
2.0
44
95
0
162
30
27
17
24
1.97
52231--52702
154
3.0
155
81
9
585
30
25
16
27
1.96
52175--52753
209
2.7
213
82
7
696
30
25
15
27
1.96
52770--52850
37
2.2
37
95
0
144
19
23
17
39
1.92
54115--54188
8
9.7
7
76
15
51
5
16
1
77
1.03
54121--54179
16
3.7
15
78
14
64
5
16
0
77
0.93
54120--54179
24
2.4
25
83
8
79
5
16
0
78
0.92
54120--54263
42
3.5
40
76
17
127
7
17
0
74
1.09
54119--54263
41
3.6
39
77
17
120
8
17
0
73
1.11
54130--54282
21
6.7
23
70
18
81
7
18
0
72
1.13
54176--54214
18
2.2
17
86
4
51
7
20
2
69
1.26
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65554--65587
11
3.1
11
95
0
59
8
35
11
44
1.72
71634--71741
40
2.7
40
88
0
144
30
12
10
47
1.74
71968--72031
24
2.6
25
85
7
94
28
0
4
67
1.11
72316--72367
19
2.8
18
72
11
52
48
3
11
36
1.58
73202--73601
122
3.3
121
82
6
425
30
16
8
45
1.76
73194--73601
121
3.3
119
80
7
408
29
16
8
45
1.76
81030--81130
41
2.5
41
91
0
157
19
17
22
39
1.92
81034--81103
21
3.4
21
66
4
61
21
18
24
35
1.95
81072--81133
20
3.0
20
69
6
54
19
16
24
40
1.91
81239--81281
6
7.2
6
100
0
86
32
48
18
0
1.48
81767--81845
6
13.5
6
97
1
108
0
16
56
26
1.40
82362--82398
2
18.5
2
100
0
74
51
0
0
48
1.00
82539--82627
44
2.0
44
100
0
178
42
14
11
31
1.81
82653--82773
30
4.0
30
89
1
188
40
12
13
33
1.82
83566--83590
4
6.2
4
100
0
50
24
0
76
0
0.80

Tables:   1

The End!