Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002084.1 Hibiscus syriacus cultivar Beakdansim tig00004256_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65722

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1871--1911
3
14.0
3
94
5
75
65
0
0
34
0.93
2857--2905
20
2.3
20
83
13
55
71
0
0
28
0.86
2857--2905
19
2.4
20
83
10
55
71
0
0
28
0.86
2844--2912
28
2.3
29
76
11
70
68
0
1
30
0.99
3640--3680
16
2.6
16
88
3
57
41
7
17
34
1.77
5388--5445
29
2.0
29
100
0
116
27
27
10
34
1.89
5976--6060
25
3.4
25
90
3
118
30
17
10
41
1.83
7988--8352
60
6.1
60
84
5
452
16
28
13
41
1.86
10803--10853
2
27.0
2
77
18
56
47
1
50
0
1.12
14072--14147
38
2.0
38
87
5
109
28
22
19
28
1.98
23255--23312
29
2.0
29
86
10
82
24
13
6
55
1.63
23294--23341
15
3.3
15
91
2
80
27
18
6
47
1.72
23273--23355
29
2.9
28
79
15
82
25
15
6
53
1.65
38198--38253
21
2.7
21
94
0
94
39
14
10
35
1.81
40342--40379
17
2.4
16
91
8
60
65
0
0
34
0.93
42343--42376
17
2.1
17
88
5
52
17
5
0
76
0.98
47683--47723
21
2.0
20
86
9
57
19
7
29
43
1.78
53779--53805
4
6.8
4
100
0
54
51
0
0
48
1.00
59650--59675
6
4.3
6
100
0
52
50
15
0
34
1.45
63389--63470
41
2.0
42
97
2
157
45
12
19
23
1.84

Tables:   1

The End!