Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: VEPZ01002092.1 Hibiscus syriacus cultivar Beakdansim tig00004266_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 59582
ACGTcount: A:0.34, C:0.17, G:0.17, T:0.32
Found at i:2059 original size:25 final size:25
Alignment explanation
Indices: 2013--2067 Score: 65
Period size: 25 Copynumber: 2.2 Consensus size: 25
2003 ATATTTTTAA
* ** *
2013 TAAATTAAAATAAATTATATATGTT
1 TAAATGAAAATAAAAAACATATGTT
*
2038 TAAATGAAAATAAAAAACATATTTT
1 TAAATGAAAATAAAAAACATATGTT
2063 TAAAT
1 TAAAT
2068 TAAGTTAACA
Statistics
Matches: 25, Mismatches: 5, Indels: 0
0.83 0.17 0.00
Matches are distributed among these distances:
25 25 1.00
ACGTcount: A:0.56, C:0.02, G:0.04, T:0.38
Consensus pattern (25 bp):
TAAATGAAAATAAAAAACATATGTT
Found at i:2105 original size:25 final size:24
Alignment explanation
Indices: 2070--2163 Score: 104
Period size: 25 Copynumber: 3.8 Consensus size: 24
2060 TTTTAAATTA
*
2070 AGTTAACAATAAAATATATTTAAT
1 AGTTAATAATAAAATATATTTAAT
2094 ATGTTAATAATAAAATATATTTAAT
1 A-GTTAATAATAAAATATATTTAAT
*
2119 AAGTTAAT-ATAAAA-ATATTTGA-
1 -AGTTAATAATAAAATATATTTAAT
2141 AGTTAATATATATAAATTATATT
1 AGTTAATA-ATA-AAA-TATATT
2164 ATATATAATT
Statistics
Matches: 61, Mismatches: 2, Indels: 12
0.81 0.03 0.16
Matches are distributed among these distances:
21 7 0.11
23 10 0.16
24 10 0.16
25 28 0.46
26 6 0.10
ACGTcount: A:0.52, C:0.01, G:0.05, T:0.41
Consensus pattern (24 bp):
AGTTAATAATAAAATATATTTAAT
Found at i:2162 original size:49 final size:50
Alignment explanation
Indices: 2068--2163 Score: 119
Period size: 49 Copynumber: 1.9 Consensus size: 50
2058 ATTTTTAAAT
2068 TAAGTTAACAATAAAATATATTTAATATGTTAATAATAAAATATATTTAA
1 TAAGTTAACAATAAAATATATTTAATATGTTAATAATAAAATATATTTAA
* *
2118 TAAGTTAA-TATAAAA-ATATTTGA-A-GTTAATATATATAAATTATATT
1 TAAGTTAACAATAAAATATATTTAATATGTTAATA-ATA-AAA-TATATT
2164 ATATATAATT
Statistics
Matches: 41, Mismatches: 2, Indels: 7
0.82 0.04 0.14
Matches are distributed among these distances:
46 7 0.17
47 4 0.10
48 10 0.24
49 12 0.29
50 8 0.20
ACGTcount: A:0.52, C:0.01, G:0.05, T:0.42
Consensus pattern (50 bp):
TAAGTTAACAATAAAATATATTTAATATGTTAATAATAAAATATATTTAA
Found at i:2407 original size:13 final size:14
Alignment explanation
Indices: 2381--2413 Score: 50
Period size: 13 Copynumber: 2.4 Consensus size: 14
2371 AATTTTTTAA
2381 AATTTAAAATAAAT
1 AATTTAAAATAAAT
*
2395 ATTTTAAAA-AAAT
1 AATTTAAAATAAAT
2408 AATTTA
1 AATTTA
2414 GAACATTGAT
Statistics
Matches: 17, Mismatches: 2, Indels: 1
0.85 0.10 0.05
Matches are distributed among these distances:
13 9 0.53
14 8 0.47
ACGTcount: A:0.61, C:0.00, G:0.00, T:0.39
Consensus pattern (14 bp):
AATTTAAAATAAAT
Found at i:3132 original size:17 final size:15
Alignment explanation
Indices: 3094--3136 Score: 59
Period size: 15 Copynumber: 2.7 Consensus size: 15
3084 GTTTGTTAAA
*
3094 ACTGAATGGTTTAGC
1 ACTGAATGATTTAGC
3109 ACTGAATGATTTAGC
1 ACTGAATGATTTAGC
3124 AGTCTGAATGATT
1 A--CTGAATGATT
3137 AAGAGGCTTT
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
15 15 0.60
17 10 0.40
ACGTcount: A:0.30, C:0.12, G:0.23, T:0.35
Consensus pattern (15 bp):
ACTGAATGATTTAGC
Found at i:4260 original size:18 final size:18
Alignment explanation
Indices: 4239--4393 Score: 231
Period size: 18 Copynumber: 8.5 Consensus size: 18
4229 TTGATTTATG
4239 ATCCAAAAAGTATTTCTA
1 ATCCAAAAAGTATTTCTA
4257 ATCCAAAAAGTATTTCTA
1 ATCCAAAAAGTATTTCTA
*
4275 ATCCAAAGAA-TATTTATA
1 ATCCAAA-AAGTATTTCTA
* *
4293 ATACAAAAAGTATTTCCA
1 ATCCAAAAAGTATTTCTA
*
4311 ATCCAAAGAGTATTTCTA
1 ATCCAAAAAGTATTTCTA
4329 ATCCAAAAAGTATTTCTA
1 ATCCAAAAAGTATTTCTA
4347 ATCATCAAAAAGTATTTCTA
1 ATC--CAAAAAGTATTTCTA
*
4367 ATCCAAAGAGTATTTCTA
1 ATCCAAAAAGTATTTCTA
4385 ATCCAAAAA
1 ATCCAAAAA
4394 ACACATTATA
Statistics
Matches: 123, Mismatches: 10, Indels: 8
0.87 0.07 0.06
Matches are distributed among these distances:
17 2 0.02
18 101 0.82
19 2 0.02
20 18 0.15
ACGTcount: A:0.46, C:0.16, G:0.06, T:0.32
Consensus pattern (18 bp):
ATCCAAAAAGTATTTCTA
Found at i:7864 original size:14 final size:14
Alignment explanation
Indices: 7845--7893 Score: 62
Period size: 14 Copynumber: 3.4 Consensus size: 14
7835 ATTGATTTTT
7845 TGAAAATTGAATTC
1 TGAAAATTGAATTC
*
7859 TGAAAAATGAATTAC
1 TGAAAATTGAATT-C
* *
7874 TGGAATTTGAATTC
1 TGAAAATTGAATTC
7888 TGAAAA
1 TGAAAA
7894 AAGAATTACA
Statistics
Matches: 28, Mismatches: 6, Indels: 2
0.78 0.17 0.06
Matches are distributed among these distances:
14 17 0.61
15 11 0.39
ACGTcount: A:0.45, C:0.06, G:0.16, T:0.33
Consensus pattern (14 bp):
TGAAAATTGAATTC
Found at i:7865 original size:15 final size:15
Alignment explanation
Indices: 7847--7894 Score: 55
Period size: 15 Copynumber: 3.3 Consensus size: 15
7837 TGATTTTTTG
7847 AAAATTGAATTCTGA
1 AAAATTGAATTCTGA
7862 AAAA-TGAATTACTG-
1 AAAATTGAATT-CTGA
* *
7876 GAATTTGAATTCTGA
1 AAAATTGAATTCTGA
7891 AAAA
1 AAAA
7895 AGAATTACAT
Statistics
Matches: 26, Mismatches: 4, Indels: 6
0.72 0.11 0.17
Matches are distributed among these distances:
14 11 0.42
15 15 0.58
ACGTcount: A:0.48, C:0.06, G:0.15, T:0.31
Consensus pattern (15 bp):
AAAATTGAATTCTGA
Found at i:8081 original size:23 final size:23
Alignment explanation
Indices: 8037--8109 Score: 58
Period size: 23 Copynumber: 3.1 Consensus size: 23
8027 TATATTGTAT
* *
8037 TATATTTTAAAAATAGTAATTAG
1 TATATTTTAAATATAGTAATTAA
** *
8060 TATATTTTAAATATCTTTATTAA
1 TATATTTTAAATATAGTAATTAA
* *
8083 AATATTATTAAAT-TATTATATTAA
1 TATATT-TTAAATATAGTA-ATTAA
8107 TAT
1 TAT
8110 TAAATATATA
Statistics
Matches: 39, Mismatches: 9, Indels: 3
0.76 0.18 0.06
Matches are distributed among these distances:
23 26 0.67
24 13 0.33
ACGTcount: A:0.45, C:0.01, G:0.03, T:0.51
Consensus pattern (23 bp):
TATATTTTAAATATAGTAATTAA
Found at i:8104 original size:24 final size:23
Alignment explanation
Indices: 8061--8106 Score: 58
Period size: 24 Copynumber: 2.0 Consensus size: 23
8051 AGTAATTAGT
*
8061 ATATTTTAAATATCTTTATTAAA
1 ATATTTTAAATATCTATATTAAA
8084 ATATTATTAAATTAT-TATATTAA
1 ATATT-TTAAA-TATCTATATTAA
8107 TATTAAATAT
Statistics
Matches: 20, Mismatches: 1, Indels: 3
0.83 0.04 0.12
Matches are distributed among these distances:
23 5 0.25
24 12 0.60
25 3 0.15
ACGTcount: A:0.46, C:0.02, G:0.00, T:0.52
Consensus pattern (23 bp):
ATATTTTAAATATCTATATTAAA
Found at i:8286 original size:32 final size:32
Alignment explanation
Indices: 8239--8318 Score: 85
Period size: 32 Copynumber: 2.5 Consensus size: 32
8229 ATCTTATATT
*
8239 ATATTATTATAATATAAT-TGATTATT-TTAGTATA
1 ATATTAATA-AATATAATATGA-TATTATTAG-A-A
*
8273 ATATTAA-AAATATAATATTATATTATTAGAA
1 ATATTAATAAATATAATATGATATTATTAGAA
8304 ATATTAATAAATATA
1 ATATTAATAAATATA
8319 TTTTAAATAT
Statistics
Matches: 41, Mismatches: 2, Indels: 8
0.80 0.04 0.16
Matches are distributed among these distances:
31 8 0.20
32 20 0.49
33 7 0.17
34 6 0.15
ACGTcount: A:0.50, C:0.00, G:0.04, T:0.46
Consensus pattern (32 bp):
ATATTAATAAATATAATATGATATTATTAGAA
Found at i:8299 original size:22 final size:24
Alignment explanation
Indices: 8269--8336 Score: 70
Period size: 23 Copynumber: 3.0 Consensus size: 24
8259 ATTATTTTAG
* *
8269 TATAATATTAAAAATA-TAAT-AT
1 TATATTATTAAAAATATTAATAAA
*
8291 TATATTATTAGAAATATTAATAAA
1 TATATTATTAAAAATATTAATAAA
* *
8315 TATATT-TTAAATATTTTAATAA
1 TATATTATTAAAAATATTAATAA
8337 TTAATATTTT
Statistics
Matches: 38, Mismatches: 6, Indels: 3
0.81 0.13 0.06
Matches are distributed among these distances:
22 14 0.37
23 17 0.45
24 7 0.18
ACGTcount: A:0.53, C:0.00, G:0.01, T:0.46
Consensus pattern (24 bp):
TATATTATTAAAAATATTAATAAA
Found at i:8342 original size:53 final size:53
Alignment explanation
Indices: 8234--8372 Score: 126
Period size: 53 Copynumber: 2.6 Consensus size: 53
8224 ATAATATCTT
* ** *
8234 ATATTATATTATTATAATATAATTGATTATTTTAGTATAATATTAAAAATATA
1 ATATTATATTATTAAAATATAATAAATTATTTTAGAATAATATTAAAAATATA
* *
8287 ATATTATATTATTAGAAATATTAATAAATATATTTTA-AAT-ATTTTAATAAT-TA
1 ATATTATATTATTA-AAATA-TAATAAAT-TATTTTAGAATAATATTAAAAATATA
* * *
8340 ATATT-T-TGATTAAAATGATATTAAAATATTTTA
1 ATATTATATTATTAAAAT-ATAATAAATTATTTTA
8373 TTAATATTAA
Statistics
Matches: 73, Mismatches: 9, Indels: 12
0.78 0.10 0.13
Matches are distributed among these distances:
49 7 0.10
50 10 0.14
51 6 0.08
52 1 0.01
53 21 0.29
54 13 0.18
55 8 0.11
56 7 0.10
ACGTcount: A:0.47, C:0.00, G:0.04, T:0.49
Consensus pattern (53 bp):
ATATTATATTATTAAAATATAATAAATTATTTTAGAATAATATTAAAAATATA
Found at i:9436 original size:23 final size:23
Alignment explanation
Indices: 9418--9478 Score: 104
Period size: 23 Copynumber: 2.7 Consensus size: 23
9408 CTCGTATAAA
9418 TGCACCGAAGTGCCACGTAGAAT
1 TGCACCGAAGTGCCACGTAGAAT
*
9441 TGCACCGAAGTGCCGCGTAGAAT
1 TGCACCGAAGTGCCACGTAGAAT
*
9464 TGCAACGAAGTGCCA
1 TGCACCGAAGTGCCA
9479 TATAAAATAT
Statistics
Matches: 35, Mismatches: 3, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
23 35 1.00
ACGTcount: A:0.30, C:0.26, G:0.28, T:0.16
Consensus pattern (23 bp):
TGCACCGAAGTGCCACGTAGAAT
Found at i:10931 original size:20 final size:20
Alignment explanation
Indices: 10903--10960 Score: 62
Period size: 20 Copynumber: 2.7 Consensus size: 20
10893 TTTCCCTTGA
10903 AGTGCATCGATACATTCTAC
1 AGTGCATCGATACATTCTAC
* *
10923 AGTGTATCGATGCATTCTTTAAC
1 AGTGCATCGATACATTC--T-AC
10946 ATGTGCATCGATACA
1 A-GTGCATCGATACA
10961 CAAATCACCT
Statistics
Matches: 30, Mismatches: 4, Indels: 4
0.79 0.11 0.11
Matches are distributed among these distances:
20 15 0.50
22 1 0.03
23 3 0.10
24 11 0.37
ACGTcount: A:0.29, C:0.21, G:0.17, T:0.33
Consensus pattern (20 bp):
AGTGCATCGATACATTCTAC
Found at i:14917 original size:98 final size:89
Alignment explanation
Indices: 14814--15082 Score: 367
Period size: 90 Copynumber: 2.9 Consensus size: 89
14804 GGTTTATGGT
14814 GAAAAATACCCGACCCAAAAAAATATATAATTTTACCTTATATATTTAGGAATAATTACAATAAT
1 GAAAAATACCCGACCCAAAAAAATATATAATTTTACCTTATATATTTAGGAATAATTACAA-AA-
* *
14879 ACCTCTCTATATATAATTTTAAAATTATTGAGG
64 A---AT-TAT-T-GAATTTT-AAATTATTGAGG
**
14912 GAAAAATACCCGACCCAAAAAAATATATAATTTTACCTTATATATTTAGGAATAAATTTGAAAAA
1 GAAAAATACCCGACCCAAAAAAATATATAATTTTACCTTATATATTTAGGAAT-AATTACAAAAA
*
14977 ATTATTGACTTTTAAATTATTGAGG
65 ATTATTGAATTTTAAATTATTGAGG
**
15002 GAAAAATACCCGACCCAAAAAAATATATAATTTTACCTTATATATTTAGGAATAAATTTGAAAAA
1 GAAAAATACCCGACCCAAAAAAATATATAATTTTACCTTATATATTTAGGAAT-AATTACAAAAA
*
15067 ATTATTGACTTTTAAA
65 ATTATTGAATTTTAAA
15083 ATTAATTGTT
Statistics
Matches: 165, Mismatches: 5, Indels: 10
0.92 0.03 0.06
Matches are distributed among these distances:
90 93 0.56
91 5 0.03
92 1 0.01
93 3 0.02
94 1 0.01
97 1 0.01
98 55 0.33
99 6 0.04
ACGTcount: A:0.46, C:0.12, G:0.08, T:0.34
Consensus pattern (89 bp):
GAAAAATACCCGACCCAAAAAAATATATAATTTTACCTTATATATTTAGGAATAATTACAAAAAA
TTATTGAATTTTAAATTATTGAGG
Found at i:15080 original size:44 final size:44
Alignment explanation
Indices: 14942--15080 Score: 110
Period size: 44 Copynumber: 3.1 Consensus size: 44
14932 AAATATATAA
14942 TTTTACCTTATATATTTAGGAATAAATTTGAAAAAATTATTGAC
1 TTTTACCTTATATATTTAGGAATAAATTTGAAAAAATTATTGAC
* * ** * *
14986 TTTTA---AAT-TATTGAGGGAA-AAATACCCGACCCAAAAAAATATAT-AA
1 TTTTACCTTATATATTTA-GGAATAAAT--TTG----AAAAAATTAT-TGAC
15032 TTTTACCTTATATATTTAGGAATAAATTTGAAAAAATTATTGAC
1 TTTTACCTTATATATTTAGGAATAAATTTGAAAAAATTATTGAC
15076 TTTTA
1 TTTTA
15081 AAATTAATTG
Statistics
Matches: 69, Mismatches: 12, Indels: 28
0.63 0.11 0.26
Matches are distributed among these distances:
40 9 0.13
41 6 0.09
42 1 0.01
43 1 0.01
44 20 0.29
46 15 0.22
47 1 0.01
48 1 0.01
49 6 0.09
50 9 0.13
ACGTcount: A:0.43, C:0.09, G:0.09, T:0.39
Consensus pattern (44 bp):
TTTTACCTTATATATTTAGGAATAAATTTGAAAAAATTATTGAC
Found at i:28720 original size:105 final size:105
Alignment explanation
Indices: 28580--28796 Score: 303
Period size: 105 Copynumber: 2.1 Consensus size: 105
28570 TGACCATCTA
* * * * * *
28580 TTCGACACAATTATCAATATAAATTGTGATGAATTTTTTTGACACTAAAAAT-TCATTTTGTGAC
1 TTCGATACTATTATCAATAGAAATTATGATAAATTTATTTGACACTAAAAATAT-ATTTTGTGAC
*
28644 CACCAATATTGTCATACTAAGT-ATTTTTCAGTAACCAAATG
65 CACCAATATTGTCACACTAAGTGATTTTT-AGTAACCAAATG
* *
28685 TTTGATACTATTATCAATAGAAATTATGATAAATTTATTTGACACTAAAAGTATATTTTGTGACC
1 TTCGATACTATTATCAATAGAAATTATGATAAATTTATTTGACACTAAAAATATATTTTGTGACC
* *
28750 ACCAATGTTGTCACACTAAGTGATTTTTAGTGACCAAATG
66 ACCAATATTGTCACACTAAGTGATTTTTAGTAACCAAATG
28790 TTCGATA
1 TTCGATA
28797 ATCAATATTA
Statistics
Matches: 98, Mismatches: 12, Indels: 4
0.86 0.11 0.04
Matches are distributed among these distances:
105 91 0.93
106 7 0.07
ACGTcount: A:0.36, C:0.14, G:0.12, T:0.38
Consensus pattern (105 bp):
TTCGATACTATTATCAATAGAAATTATGATAAATTTATTTGACACTAAAAATATATTTTGTGACC
ACCAATATTGTCACACTAAGTGATTTTTAGTAACCAAATG
Found at i:38934 original size:63 final size:63
Alignment explanation
Indices: 38843--39137 Score: 358
Period size: 63 Copynumber: 4.6 Consensus size: 63
38833 GGAGGCTTGC
* *
38843 TTGGTGGCTTAGTTGTTGGAGGATGAACTGGTGACTTGGGTGGCGGGTAAGTCGGCGGTTTGGTT
1 TTGGTGGCTTA---GTTGGAGGATGAACTGGTGACTTGGGTGGCGGGTAAGTCGGCGGTTTAGTG
*
38908 T
63 G
* * * *
38909 TTGGTGGCTTAGTTGGAGGATGAACTGGTGACTTAGGTGGCGGGTAGGTCGGCGGTTTGGTAG
1 TTGGTGGCTTAGTTGGAGGATGAACTGGTGACTTGGGTGGCGGGTAAGTCGGCGGTTTAGTGG
* * * * * *
38972 TTGGTGGCTTAGTTGTAGGATGAACTGGTGGCTTGGGTGGCGGATATGTCGGTGGTTTAATGG
1 TTGGTGGCTTAGTTGGAGGATGAACTGGTGACTTGGGTGGCGGGTAAGTCGGCGGTTTAGTGG
* * * *
39035 TTGGTGGCTTAGTTGGAGGATGAACTGGTTG-CTTGGCTGGCAGGTAAGTGGGTGGTTTAGTGG
1 TTGGTGGCTTAGTTGGAGGATGAACTGG-TGACTTGGGTGGCGGGTAAGTCGGCGGTTTAGTGG
* ** *
39098 TCGGTGGCTTTTTTGGAGGATGAACTGGTGGCTTGGGTGG
1 TTGGTGGCTTAGTTGGAGGATGAACTGGTGACTTGGGTGG
39138 TGCAGGAGTG
Statistics
Matches: 203, Mismatches: 24, Indels: 7
0.87 0.10 0.03
Matches are distributed among these distances:
62 2 0.01
63 188 0.93
64 2 0.01
66 11 0.05
ACGTcount: A:0.13, C:0.09, G:0.44, T:0.34
Consensus pattern (63 bp):
TTGGTGGCTTAGTTGGAGGATGAACTGGTGACTTGGGTGGCGGGTAAGTCGGCGGTTTAGTGG
Found at i:42493 original size:66 final size:66
Alignment explanation
Indices: 42405--42531 Score: 184
Period size: 66 Copynumber: 1.9 Consensus size: 66
42395 AGGCATGAAA
** * *
42405 TAAATATTTCTTTTGTTAAAATAAATTCCTAAA-ATTTTCGAGTTCAAATATGATGTCTATAGAA
1 TAAATATTTCACTTATTAAAATAAATTCCTAAACA-TTTCGAGTTCAAATATGATGACTATAGAA
42469 TC
65 TC
* *
42471 TAAATATTTCACTTATTGAAATAAATTCCTAAACATTTCGAGTTCAGATATGATGACTATA
1 TAAATATTTCACTTATTAAAATAAATTCCTAAACATTTCGAGTTCAAATATGATGACTATA
42532 AAATATTTGA
Statistics
Matches: 54, Mismatches: 6, Indels: 2
0.87 0.10 0.03
Matches are distributed among these distances:
66 53 0.98
67 1 0.02
ACGTcount: A:0.39, C:0.12, G:0.09, T:0.40
Consensus pattern (66 bp):
TAAATATTTCACTTATTAAAATAAATTCCTAAACATTTCGAGTTCAAATATGATGACTATAGAAT
C
Found at i:48479 original size:31 final size:31
Alignment explanation
Indices: 48436--48511 Score: 107
Period size: 31 Copynumber: 2.5 Consensus size: 31
48426 TTAACCTATG
*
48436 GTGATCACATCTTAAATAAACAAAAACAAAA
1 GTGATCATATCTTAAATAAACAAAAACAAAA
* * *
48467 GTGATCATATCTTAATTAAATAAAAACGAAA
1 GTGATCATATCTTAAATAAACAAAAACAAAA
*
48498 GTGACCATATCTTA
1 GTGATCATATCTTA
48512 TGTATTTTGA
Statistics
Matches: 40, Mismatches: 5, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
31 40 1.00
ACGTcount: A:0.50, C:0.14, G:0.09, T:0.26
Consensus pattern (31 bp):
GTGATCATATCTTAAATAAACAAAAACAAAA
Found at i:51964 original size:2 final size:2
Alignment explanation
Indices: 51957--51989 Score: 66
Period size: 2 Copynumber: 16.5 Consensus size: 2
51947 TCTATTTTCT
51957 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA T
1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA T
51990 TTATTTATTT
Statistics
Matches: 31, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 31 1.00
ACGTcount: A:0.48, C:0.00, G:0.00, T:0.52
Consensus pattern (2 bp):
TA
Done.