Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002095.1 Hibiscus syriacus cultivar Beakdansim tig00004278_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61591

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5596--5625
12
2.4
13
94
5
53
50
0
0
50
1.00
7363--7418
16
3.9
14
80
19
62
58
5
1
33
1.31
7369--7419
16
3.2
16
88
2
77
60
5
1
31
1.31
11654--11733
39
2.1
39
90
4
126
25
18
33
22
1.97
15909--15935
14
1.9
14
100
0
54
55
7
0
37
1.28
18027--18094
23
3.1
22
71
24
63
50
1
0
48
1.10
18021--18112
22
4.1
21
76
19
73
50
1
0
48
1.08
18014--18112
44
2.2
45
81
10
114
51
1
0
47
1.07
18530--18565
15
2.4
15
100
0
72
36
0
22
41
1.54
18959--19115
77
2.0
77
92
0
260
40
10
8
40
1.69
20822--20867
2
23.0
2
86
0
65
56
0
0
43
0.99
22656--22697
23
1.9
21
85
9
57
54
16
16
11
1.70
27963--28048
41
2.1
39
85
10
111
33
8
12
45
1.72
28035--28090
27
2.1
27
83
6
69
41
12
16
30
1.85
36380--36530
47
3.2
46
83
2
185
24
11
36
27
1.90
37026--37823
137
5.8
136
88
2
1183
22
17
29
29
1.97
36903--37823
273
3.4
272
87
3
1307
23
18
29
29
1.97
42470--42762
146
2.0
146
98
0
568
30
19
17
32
1.95
46636--46928
146
2.0
146
97
0
550
31
19
17
32
1.95

Tables:   1

The End!