Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002102.1 Hibiscus syriacus cultivar Beakdansim tig00004300_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61869

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
872--951
36
2.2
38
84
10
114
31
37
3
27
1.74
8449--11126
932
2.9
932
98
0
5196
29
17
22
31
1.97
14730--14782
17
3.1
17
83
0
70
39
5
15
39
1.70
14789--14848
16
3.5
17
84
8
70
41
11
15
31
1.82
18008--18075
17
3.9
17
82
1
73
41
5
11
41
1.66
18067--18125
18
3.5
17
84
9
68
40
11
15
32
1.83
18774--18814
22
1.9
21
90
5
64
36
36
2
24
1.69
26733--26778
11
4.0
12
80
8
51
71
2
10
15
1.23
29679--30034
178
2.0
178
99
0
703
51
13
2
32
1.54
34955--34999
16
2.8
16
80
10
56
0
13
6
80
0.91
35196--35235
20
2.0
20
85
0
53
55
2
27
15
1.53
48891--49063
90
1.9
89
92
1
292
44
6
10
37
1.67
53195--53235
22
1.9
21
90
5
64
34
36
2
26
1.70
55583--55620
17
2.2
17
100
0
76
0
10
10
78
0.95

Tables:   1

The End!