Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002103.1 Hibiscus syriacus cultivar Beakdansim tig00004301_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39857

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1819--1853
18
1.9
18
94
0
61
54
25
2
17
1.57
2031--2290
20
13.7
20
77
11
215
35
21
19
23
1.96
2056--2210
52
2.9
53
85
3
204
38
21
20
20
1.94
2424--2503
30
2.4
34
80
20
114
55
15
3
26
1.57
2439--2504
30
2.2
30
100
0
132
54
13
3
28
1.54
3343--3371
13
2.2
13
100
0
58
17
20
37
24
1.93
9282--9345
27
2.5
25
70
14
58
48
3
0
48
1.17
12674--12793
29
4.2
28
76
9
107
34
5
19
40
1.75
17513--17542
13
2.3
13
94
0
51
16
43
23
16
1.87
17564--17693
29
4.5
28
83
5
143
31
5
21
41
1.76
17564--17704
59
2.4
58
82
5
160
32
4
21
41
1.74
17564--17713
29
5.1
29
79
6
108
32
4
21
42
1.73
18044--18069
8
3.2
8
100
0
52
23
0
11
65
1.25
19870--19952
40
2.1
40
95
0
148
27
16
33
21
1.95
24807--24932
29
4.4
29
78
14
120
35
5
19
39
1.75
24832--24932
28
3.5
29
78
16
95
36
5
16
40
1.73
33656--33713
2
29.0
2
100
0
116
50
0
0
50
1.00

Tables:   1

The End!