Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000211.1 Hibiscus syriacus cultivar Beakdansim tig00000374_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48275

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2007--2048
17
2.5
17
85
14
52
71
2
14
11
1.24
3936--3969
17
2.0
17
100
0
68
29
17
23
29
1.97
6124--6264
64
2.2
63
82
5
167
32
18
22
26
1.97
7548--7674
18
6.9
18
93
1
209
19
22
31
25
1.98
13252--13364
37
3.0
37
67
21
90
42
11
7
38
1.68
13252--13363
38
3.0
38
68
20
90
41
11
7
39
1.69
16360--16433
26
2.6
30
81
18
111
37
35
13
13
1.84
16365--16427
26
2.4
26
100
0
126
39
31
12
15
1.85
17498--17531
15
2.2
16
89
5
52
38
2
0
58
1.13
17730--17775
21
2.2
20
88
11
67
23
0
4
71
1.03
17730--17775
20
2.2
21
88
11
69
23
0
4
71
1.03
21686--21747
29
2.1
29
82
5
72
32
6
12
48
1.67
22189--22218
11
2.7
11
89
0
51
86
3
0
10
0.67
26080--26146
6
11.2
6
96
0
107
29
49
16
4
1.65
26144--26192
5
9.8
5
93
0
62
16
36
40
6
1.73
32046--32098
6
9.2
6
89
8
74
30
49
16
3
1.64
32096--32144
5
9.8
5
93
0
62
16
36
40
6
1.73
39559--39584
2
13.0
2
100
0
52
50
0
0
50
1.00
40745--40930
65
2.9
64
79
8
200
31
23
18
26
1.97
40745--40904
65
2.5
66
85
5
202
32
23
18
26
1.97
40876--40924
19
2.6
19
84
9
57
24
28
20
26
1.99
46678--46758
24
3.5
24
70
20
75
22
24
23
29
1.99

Tables:   1

The End!