Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002111.1 Hibiscus syriacus cultivar Beakdansim tig00004320_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58136

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5958--6012
29
2.0
26
82
10
65
54
18
18
9
1.69
15839--15883
21
2.1
22
87
4
65
48
0
0
51
1.00
26864--27112
78
3.0
78
78
13
291
27
6
22
42
1.79
26942--27114
90
1.9
90
91
0
283
28
6
21
42
1.79
28494--28935
37
12.6
37
73
16
256
45
4
7
43
1.50
28654--28916
100
2.6
103
79
10
280
47
3
5
42
1.45
28751--28853
35
2.8
36
82
4
136
49
4
5
39
1.48
28799--28935
33
4.2
33
78
16
124
45
3
6
43
1.47
31545--31577
17
1.9
17
93
0
57
6
12
9
72
1.26
35627--36520
84
10.7
84
84
3
1076
29
24
20
24
1.99
35627--36606
417
2.3
414
83
5
1281
30
23
20
25
1.98
37130--37578
36
12.6
35
71
17
214
45
4
6
43
1.48
37130--37580
37
12.6
37
73
15
278
45
3
6
43
1.48
37153--37579
74
6.0
71
76
14
332
46
3
6
43
1.47
37149--37580
35
12.1
35
73
17
214
45
3
6
43
1.48
42450--42489
17
2.4
17
100
0
80
12
50
5
32
1.62
42828--42910
3
27.7
3
100
0
166
33
0
0
66
0.92
49575--49606
2
16.0
2
100
0
64
50
0
0
50
1.00
54443--54532
22
4.1
22
87
5
119
35
20
20
24
1.96
55335--55376
21
2.0
21
100
0
84
23
23
28
23
2.00
55378--55418
12
3.6
12
74
12
50
17
14
19
48
1.81
55376--55418
22
2.0
22
95
0
77
18
16
18
46
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56730--56760
2
15.5
2
100
0
62
0
48
0
51
1.00

Tables:   1

The End!