Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002140.1 Hibiscus syriacus cultivar Beakdansim tig00004374_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43872

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
734--767
12
2.8
12
90
4
50
32
29
38
0
1.58
2686--2742
30
1.9
30
96
0
105
47
19
3
29
1.66
4016--4061
20
2.4
19
85
7
58
30
13
6
50
1.66
5515--5574
30
2.0
30
96
0
111
45
20
5
30
1.72
13709--13785
37
2.1
37
85
4
102
46
2
2
48
1.29
14679--14710
7
4.6
7
96
0
55
15
0
21
62
1.32
25990--26030
21
2.0
21
85
4
57
43
4
17
34
1.70
26790--26853
21
3.0
21
88
0
101
12
26
40
20
1.88
29583--29618
16
2.3
15
90
4
54
41
0
5
52
1.24
30662--30763
20
5.1
20
87
3
134
13
28
38
19
1.90

Tables:   1

The End!