Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002153.1 Hibiscus syriacus cultivar Beakdansim tig00004395_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70688

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3524--3551
2
14.0
2
100
0
56
50
0
0
50
1.00
9213--9238
2
13.0
2
100
0
52
0
50
0
50
1.00
11740--11764
13
1.9
13
100
0
50
44
0
0
56
0.99
12917--12967
25
2.0
25
96
0
93
43
13
13
29
1.83
15623--15656
3
11.3
3
93
0
59
32
2
0
64
1.08
20361--20424
26
2.5
26
73
14
71
39
9
6
45
1.62
20477--20516
14
3.1
13
86
10
55
55
0
2
42
1.13
21145--21170
9
2.9
9
100
0
52
80
0
7
11
0.89
22439--22505
30
2.2
30
86
0
98
37
1
1
59
1.16
22510--22573
27
2.4
27
97
0
119
43
9
6
40
1.62
23369--23429
22
2.8
23
82
7
65
47
0
0
52
1.00
23718--23785
20
3.4
20
95
0
127
33
14
10
41
1.80
23770--23822
15
3.5
15
89
0
79
35
16
7
39
1.78
27080--27113
15
2.4
15
90
9
54
47
0
2
50
1.16
41292--41333
22
2.0
22
85
4
59
42
0
2
54
1.13
58382--58411
11
2.7
11
94
0
51
46
0
16
36
1.47
60505--60629
36
3.6
35
81
5
137
11
14
33
40
1.81
61709--61766
3
19.3
3
100
0
116
67
0
0
32
0.91
65291--65368
2
39.0
2
100
0
156
50
0
0
50
1.00
65562--65653
31
3.0
30
71
14
82
28
17
19
34
1.94
67677--67751
37
2.0
37
82
10
91
49
4
1
45
1.29

Tables:   1

The End!