Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002154.1 Hibiscus syriacus cultivar Beakdansim tig00004401_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73334

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13716--13787
30
2.4
29
79
4
81
33
11
16
38
1.84
24182--24216
7
5.0
7
86
13
54
74
0
25
0
0.82
24183--24215
15
2.3
14
94
5
57
78
0
21
0
0.75
29916--29942
10
2.7
10
100
0
54
77
7
14
0
0.97
29899--29945
13
3.8
13
78
16
55
82
8
8
0
0.83
33097--33141
21
2.1
21
87
0
63
31
28
24
15
1.96
34530--34846
151
2.1
150
95
2
575
28
16
20
34
1.94
34814--34858
23
2.0
23
86
0
63
24
26
24
24
2.00
38141--38185
21
2.1
21
87
0
63
31
28
24
15
1.96
39649--39963
149
2.1
149
95
1
560
28
16
20
34
1.94
43666--43699
16
2.2
16
89
5
52
23
17
8
50
1.74
54867--55068
31
6.5
31
98
0
377
39
22
18
19
1.92
55958--56002
21
2.1
21
87
0
63
15
24
28
31
1.96
59774--59991
31
7.0
31
94
1
366
37
22
19
20
1.94
60880--60924
21
2.1
21
87
0
63
15
24
28
31
1.96
60930--60970
23
1.9
22
85
14
59
31
19
7
41
1.79
62800--62876
25
3.1
25
71
14
77
31
20
23
24
1.98
63207--63256
25
2.0
25
84
7
66
40
4
12
44
1.60
67714--67743
15
2.1
14
93
6
51
33
6
6
53
1.53

Tables:   1

The End!