Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002156.1 Hibiscus syriacus cultivar Beakdansim tig00004403_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53146

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9058--9141
39
2.2
39
100
0
168
34
15
23
26
1.95
9354--9390
19
2.0
18
89
5
56
78
0
10
10
0.97
11429--11484
18
3.1
19
73
23
57
41
5
1
51
1.35
30159--30220
25
2.5
26
81
7
74
54
3
0
41
1.16
30687--30745
21
2.7
22
82
12
68
72
3
11
11
1.23
30706--30745
21
2.0
21
95
5
73
72
5
15
7
1.24
30712--30754
21
2.2
20
87
8
61
72
4
13
9
1.26
34552--34628
29
2.6
29
89
2
109
48
14
6
31
1.69
34815--34884
29
2.4
29
87
2
95
52
12
2
31
1.54
34631--35008
138
2.7
139
87
2
501
43
11
10
35
1.74
34945--35018
29
2.5
29
84
2
103
45
9
9
35
1.69
34964--35025
29
2.1
29
87
0
88
45
8
9
37
1.67
40622--40654
14
2.4
14
94
0
57
6
30
39
24
1.79
40641--40677
10
3.7
10
86
13
58
10
27
37
24
1.88
40641--40678
20
1.9
20
100
0
76
10
28
36
23
1.88
42680--42726
25
1.9
25
87
12
71
42
0
4
53
1.20
42809--42846
19
2.0
19
85
10
51
28
10
7
52
1.64
42949--43006
2
29.5
2
78
3
55
48
3
3
44
1.36
43891--44066
82
2.1
82
91
0
289
33
18
13
35
1.89
44992--45042
22
2.4
21
87
6
68
54
0
0
45
0.99
44993--45039
21
2.2
21
84
3
58
57
0
0
42
0.98

Tables:   1

The End!