Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002157.1 Hibiscus syriacus cultivar Beakdansim tig00004404_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75982

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
905--932
2
14.0
2
100
0
56
50
0
50
0
1.00
29835--29888
23
2.4
23
77
17
60
31
0
3
64
1.11
30588--30767
90
2.0
89
91
1
288
39
15
15
30
1.87
39784--39898
57
2.0
57
100
0
230
17
26
6
49
1.71
43213--43253
22
1.9
22
85
5
57
53
7
0
39
1.29
45170--45228
22
2.7
22
97
0
109
23
10
30
35
1.88
45870--45901
12
2.6
13
90
9
50
56
15
9
18
1.66
48216--48254
19
2.0
21
90
10
64
15
5
5
74
1.17
56042--56087
22
2.1
22
91
0
74
15
34
19
30
1.93
64333--64384
19
2.8
18
77
11
61
50
0
0
50
1.00
65338--65369
2
16.0
2
100
0
64
0
50
0
50
1.00
73962--74017
27
2.0
27
86
6
76
51
3
1
42
1.29

Tables:   1

The End!