Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002162.1 Hibiscus syriacus cultivar Beakdansim tig00004414_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64949

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1816--1851
18
2.1
18
89
5
56
47
0
5
47
1.25
3248--3301
22
2.4
22
82
14
65
51
0
0
48
1.00
3259--3306
18
2.4
21
86
13
66
52
0
0
47
1.00
3563--3601
2
20.0
2
94
5
71
51
0
0
48
1.00
24801--24848
22
2.2
22
81
7
53
66
0
0
33
0.92
24815--24856
22
2.0
22
85
4
59
59
2
2
35
1.23
25871--25936
29
2.3
29
91
0
114
45
9
12
33
1.73
26184--26238
28
2.0
28
100
0
110
40
18
21
20
1.92
28798--28835
16
2.3
17
86
9
60
42
0
0
57
0.98
33302--33413
59
1.9
59
85
3
154
50
7
1
41
1.40
43370--43504
66
2.0
67
98
1
263
36
16
19
28
1.93
49904--49938
17
2.1
17
89
5
54
25
0
60
14
1.35
51385--51429
2
23.0
2
81
4
56
42
0
6
51
1.28
51385--51429
12
3.8
12
91
2
65
42
0
6
51
1.28
54690--54755
31
2.1
31
91
0
105
34
13
18
33
1.90
54947--54996
25
2.0
24
85
14
66
66
2
4
28
1.21
54953--54995
6
6.7
6
87
12
59
67
2
2
27
1.15
55190--55229
8
4.8
8
87
6
53
27
0
2
70
1.01
55190--55229
17
2.3
18
87
8
57
27
0
2
70
1.01
55204--55246
20
2.3
18
84
8
59
32
0
2
65
1.06
55424--55501
30
2.5
31
87
4
113
32
8
16
42
1.79

Tables:   1

The End!