Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000217.1 Hibiscus syriacus cultivar Beakdansim tig00000385_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69160

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
226--377
2
78.5
2
72
18
117
45
1
4
48
1.31
313--354
19
2.2
20
83
12
61
45
4
2
47
1.36
319--365
19
2.6
18
87
9
69
44
4
0
51
1.21
351--389
19
2.2
18
86
9
53
41
0
5
53
1.23
391--424
13
2.5
14
90
4
52
47
11
5
35
1.65
391--432
14
3.1
14
86
3
50
50
9
7
33
1.62
2180--2209
16
1.9
16
93
6
53
26
13
16
43
1.85
3071--3113
18
2.4
18
92
0
68
41
13
23
20
1.88
10488--10515
12
2.3
12
100
0
56
39
0
0
60
0.97
15808--15926
43
2.8
43
88
0
175
31
29
16
21
1.96
16177--16470
83
3.6
80
81
5
257
31
23
19
25
1.98
16216--16456
80
3.0
79
83
4
257
31
24
19
25
1.98
16480--16929
83
5.5
83
85
3
536
31
22
20
26
1.98
16571--17304
391
1.9
395
86
3
1048
31
21
20
26
1.98
16177--17288
474
2.3
474
90
0
1742
31
22
20
25
1.98
16948--17313
83
4.4
83
87
2
459
30
21
21
25
1.99
20930--20960
14
2.2
14
94
0
53
6
12
25
54
1.62
20921--20967
24
2.0
24
100
0
94
8
12
23
55
1.64
20919--20980
24
2.6
24
89
0
88
12
12
19
54
1.70
22049--22105
24
2.3
25
90
6
89
5
12
24
57
1.55
22065--22101
16
2.3
16
95
0
65
2
13
27
56
1.50
22112--22192
31
2.6
31
98
0
153
46
16
14
22
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32435--32492
15
3.9
15
93
0
89
24
17
24
34
1.96
32686--32716
16
1.9
16
93
0
53
54
0
0
45
0.99
38878--38922
23
2.0
23
86
8
65
11
28
4
55
1.54
61035--61078
22
2.1
20
83
8
52
47
2
15
34
1.58
68516--68550
13
2.7
13
86
0
52
28
25
22
22
1.99

Tables:   1

The End!