Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002171.1 Hibiscus syriacus cultivar Beakdansim tig00004427_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71790

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3308--3357
24
2.1
24
88
7
75
58
14
2
26
1.47
8129--8190
30
2.1
30
90
0
97
35
25
9
29
1.88
21802--21850
25
2.0
25
84
8
64
26
4
6
63
1.36
29120--29195
36
2.1
36
85
7
100
47
1
3
47
1.29
45139--45169
15
2.1
15
94
5
55
74
0
6
19
1.03
50265--50292
13
2.2
13
100
0
56
25
14
21
39
1.91
50522--50625
30
3.4
30
83
9
122
36
2
2
57
1.28
50685--50780
30
3.2
29
81
11
88
44
3
0
52
1.17
50837--50887
25
2.0
25
85
7
68
50
0
7
41
1.31
50921--50963
14
3.0
14
86
3
59
51
0
2
46
1.13
51002--51079
30
2.6
29
84
9
95
57
2
6
33
1.38
53223--53267
19
2.4
19
96
0
81
31
15
17
35
1.92
53578--53628
19
2.7
19
93
3
86
52
5
11
29
1.61
53772--53836
18
3.4
18
74
12
67
29
4
16
49
1.66
53774--53848
39
1.9
39
97
0
141
26
5
18
49
1.69
55630--55727
23
4.3
23
76
5
99
19
24
24
31
1.98
57152--57195
18
2.5
17
81
7
52
40
0
2
56
1.11
58002--58044
17
2.5
17
82
14
52
74
0
4
20
1.00

Tables:   1

The End!