Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002179.1 Hibiscus syriacus cultivar Beakdansim tig00004439_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76057

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10584--10665
23
3.6
23
74
14
89
24
24
23
28
2.00
12230--12276
21
2.2
21
100
0
94
4
40
12
42
1.63
15991--16038
20
2.4
20
82
0
60
37
10
8
43
1.69
18089--18954
434
2.0
434
90
0
1369
20
18
15
45
1.85
24414--24459
23
2.0
23
100
0
92
17
8
47
26
1.76
43638--43694
20
3.0
18
73
26
55
24
12
36
26
1.91
61800--61841
15
2.9
15
80
16
52
64
2
0
33
1.07
63528--63571
21
2.1
21
95
0
79
29
29
18
22
1.97
63537--63585
21
2.4
21
86
3
64
36
26
12
24
1.91
63550--63645
42
2.3
41
80
1
111
36
21
18
22
1.95
63640--64098
244
1.9
235
81
7
537
33
15
17
33
1.91
64058--64140
42
2.0
42
90
4
132
34
19
18
27
1.95
64068--64140
20
3.5
20
74
17
69
36
17
19
26
1.94
65558--65676
39
3.1
39
85
2
168
28
20
13
37
1.90
71153--71184
16
2.0
16
100
0
64
37
25
12
25
1.91
72290--72318
14
2.1
14
100
0
58
27
0
0
72
0.85

Tables:   1

The End!