Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000218.1 Hibiscus syriacus cultivar Beakdansim tig00000386_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  82558

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12219--12266
25
1.9
25
86
0
69
35
22
12
29
1.91
30435--30469
2
17.5
2
93
0
61
45
0
0
54
0.99
30542--30574
6
5.7
6
85
7
50
81
3
0
15
0.80
31965--32029
3
21.3
3
76
14
53
64
0
1
33
1.03
31949--32009
26
2.3
26
88
5
88
62
0
1
36
1.05
31969--32028
20
3.1
19
78
9
59
66
0
1
31
1.01
32372--32700
113
2.9
112
89
3
493
27
19
16
36
1.93
34437--34613
75
2.4
75
76
1
176
29
24
12
33
1.92
37805--37833
8
3.8
8
90
9
51
0
20
0
79
0.74
39911--39948
19
2.0
19
100
0
76
21
36
15
26
1.93
40007--40055
19
2.6
19
84
9
57
24
30
18
26
1.98
48126--48165
21
1.9
21
94
0
71
32
30
15
22
1.94
48127--48251
64
1.9
66
84
11
168
34
24
15
26
1.94
48146--48271
64
2.0
64
82
7
157
33
23
15
28
1.94
54067--54146
24
3.5
22
78
14
92
22
26
23
27
2.00
56688--56727
21
1.9
21
94
0
71
32
30
15
22
1.94
56753--56791
19
2.1
19
95
0
69
20
38
15
25
1.92
56688--56852
64
2.5
65
83
8
185
33
26
14
25
1.94
56688--56890
64
3.1
64
79
9
182
32
26
14
26
1.94
58915--58998
34
2.8
28
69
19
69
55
15
13
15
1.69
59081--59163
43
1.9
44
82
2
105
36
20
10
32
1.87
61414--61443
14
2.1
15
93
6
53
76
6
0
16
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62032--62058
13
2.1
13
100
0
54
37
7
22
33
1.82
62937--63008
3
24.3
3
76
18
62
65
0
1
33
1.02
62920--62988
29
2.3
29
85
7
95
62
0
1
36
1.04
62969--63004
14
2.8
13
88
12
56
72
0
0
27
0.85
62969--63007
16
2.7
14
88
11
53
71
0
0
28
0.86
69343--69382
21
1.9
21
90
10
64
15
15
47
22
1.82
71775--71888
32
3.6
32
80
5
115
34
19
14
31
1.92

Tables:   1

The End!