Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002183.1 Hibiscus syriacus cultivar Beakdansim tig00004450_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55108

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13618--13759
2
74.0
2
71
15
68
40
0
5
53
1.30
13615--13759
13
10.6
14
70
23
80
40
0
5
53
1.29
13723--13810
26
3.6
25
73
22
89
50
1
1
47
1.16
13723--13815
24
3.8
24
75
11
91
47
1
2
49
1.20
13838--13878
2
20.5
2
90
9
66
46
0
2
51
1.14
16735--16833
20
5.2
19
64
18
55
42
3
3
51
1.32
16814--16898
42
2.1
41
81
14
99
43
3
5
47
1.44
16993--17044
2
26.0
2
88
7
79
48
1
1
48
1.24
20098--20125
10
2.8
10
100
0
56
28
21
17
32
1.96
20183--20345
15
10.5
15
86
9
220
46
0
1
51
1.11
20348--20390
22
2.0
22
95
0
77
37
0
11
51
1.39
20325--20476
32
5.4
31
71
28
151
36
0
11
52
1.37
20243--20400
69
2.3
67
88
6
230
42
0
5
51
1.25
20325--20493
54
3.1
54
99
0
329
35
0
11
52
1.38
20402--20444
22
2.0
22
100
0
86
34
0
13
51
1.42
20424--20573
80
1.9
80
100
0
300
32
0
15
52
1.43
20536--20578
22
2.0
22
100
0
86
34
0
13
51
1.42
23447--23523
30
2.5
31
87
8
113
53
12
11
22
1.71
25149--25256
51
2.1
51
91
0
171
48
11
9
31
1.70
34311--34351
21
2.0
21
85
0
55
34
17
9
39
1.82
42763--42803
20
2.1
19
86
9
55
39
14
17
29
1.89

Tables:   1

The End!